Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_4118 |
Symbol | |
ID | 9140838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 5283933 |
End bp | 5285891 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | acetate/CoA ligase |
Protein accession | YP_003632128 |
Protein GI | 296124350 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACT CTGGCAGTAT TCAAAGTACG CTCCAGGAAA CGCGAAAGTT TCTGCCTGCG AGTGAATTCT CGGCACAGGC ACACATTTCG AGTGAAGAGC AATATCAGTC GATGTGGCAG AAGGCCAAAG ACGACCCAGC CGGTTTCTGG GGAGAGCTTT CACAGGAATT GCAGTGGATC AAACCGTGGA CGGAAGTCAT TTCGGGAGAA ATGCCCGAAA CACGCTGGTT CACGGGAGGG CAGATCAACG CCTGCGAAAA CTGTGTTGAT CGACATCTCA CCAGTTGGCG GCGCAATAAG GCAGCGATTC TGTGGGAAGG CGAACCAGGC GACACGCGCG TGCTGACGTA CAACGATCTG CACCGGGAAG TGAGCAAGTT CGCGAATGTG CTCAAAAAAC TGGGTGTCAA TACGGGTGAT CGAGTCACGC TCTACATGCC CATGATTCCC GAACTGGCCA TTGCGATGCT GGCCTGCGCC AGAATTGGCG CGACTCACTC GATTATCTTT GGTGGCTTCA GTGCCGATGC GGTCGCTGAT CGAAACAACG ATGCTCAAGC CAAAATTATC GTGACGGCAG ATGGTGGCTG GCGGCGTGGC AAGGAAGTTC CACTGAAGTC GGCCGTTGAC GAAAGTCTGA CCAAGAGCCA CACCGTGCAG AAGGTGGTGG TCGTCCGGCG GACGGGTCAG CAGGTTCATA TGCAGACCGA CCGCGACTAC TGGTGGCATG ATCTGATGAG TGATGTGGAT CCGCATTGCG ATGTGGTACC ACTCGACAGT GAGCATCCGC TATTTATTCT GTATACCTCA GGCAGTACTG GCAAACCCAA AGGTGTAATG CATACGACAG CGGGTTATCT GCTGGGTACC ACCATGACCA GCCGCTGGGT CTTTGACCTG AAGGAAGAAG ACACTTACTG GTGTACTGCC GATATTGGCT GGATTACGGG GCATAGCTAT GTGGTCTACG GGCCGCTCTC GAATGGCTCG ACAGTCGTGA TGTACGAAGG AGCTCCGAAC TGGCCGGATG AGGGCCGCTT CTGGGAAATT ATCGAGAAGT ACCGAGTCAG TATCTTCTAC ACCGCACCCA CTGCCATTCG AGCCTTTATC AAGTGGGGCG ATCATTGGCC GCAAAGCCGG GATCTTTCGA GTTTGAGACT GCTGGGTTCG GTGGGTGAGC CCATCAATCC GGAAGCCTGG ATGTGGTATC ACCGCATGAT AGGTCAGGAA CGCTGCCCGA TTGTCGATAC CTGGTGGCAG ACCGAAACCG GAGCGATCAT GATCAGCCCG CTGCCAGGTA TCTCGGCAAC CAAACCCGGT AGCTGTACTC GACCGCTACC TGGTGTGGTG CCAGAGATTG TCAGTAAAGA GGGAACGCCA CTGGAAGCCA ACGAAGGTGG TCTGCTGGTG ATGAAGCAAC CGTGGCCCAG TATGCTGCGC ACGCTCTATG GGGATCATGA GCGATTCAAG CAGACTTACT TCAGCACGAT TGAAGGAGCT TACTTTGCCG GTGATGGGGC CCGACGTGAT GCTGATGGCG ACATCTGGGT GATGGGCCGA GTGGACGATG TGCTCAATGT TTCGGGGCAT CGCTTGAGTA CCATGGAAGT GGAAAGTTCA CTGGTGGCTC ATCCGGCAGT GGCTGAGGCG GCTGTCGTGG GCTTCCCGCA TGAAATTAAA GGGGAAGGGA TCTGCTGTTT TGTGACGTTG AAGACAGCTG ATTCCGAGGG TTCAGACTCA CTCACTGCAG ATCTGATTCA GCATGTCCGC AAGCAGATTG GTGCTCTCGC GACACCTGAC AAGATCCGCT ACACGGCAGC ACTTCCGAAA ACTCGCAGTG GCAAGATCAT GCGCAGGCTC CTGCGAGATA TTGCGGCTGG GCGGGAGTCG GTTCAGGACA CGACGACTCT GGAAGATCTC TCGATTCTCG CCAAGTTGCG TGATAGCGAT GACGCGTGA
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Protein sequence | MTNSGSIQST LQETRKFLPA SEFSAQAHIS SEEQYQSMWQ KAKDDPAGFW GELSQELQWI KPWTEVISGE MPETRWFTGG QINACENCVD RHLTSWRRNK AAILWEGEPG DTRVLTYNDL HREVSKFANV LKKLGVNTGD RVTLYMPMIP ELAIAMLACA RIGATHSIIF GGFSADAVAD RNNDAQAKII VTADGGWRRG KEVPLKSAVD ESLTKSHTVQ KVVVVRRTGQ QVHMQTDRDY WWHDLMSDVD PHCDVVPLDS EHPLFILYTS GSTGKPKGVM HTTAGYLLGT TMTSRWVFDL KEEDTYWCTA DIGWITGHSY VVYGPLSNGS TVVMYEGAPN WPDEGRFWEI IEKYRVSIFY TAPTAIRAFI KWGDHWPQSR DLSSLRLLGS VGEPINPEAW MWYHRMIGQE RCPIVDTWWQ TETGAIMISP LPGISATKPG SCTRPLPGVV PEIVSKEGTP LEANEGGLLV MKQPWPSMLR TLYGDHERFK QTYFSTIEGA YFAGDGARRD ADGDIWVMGR VDDVLNVSGH RLSTMEVESS LVAHPAVAEA AVVGFPHEIK GEGICCFVTL KTADSEGSDS LTADLIQHVR KQIGALATPD KIRYTAALPK TRSGKIMRRL LRDIAAGRES VQDTTTLEDL SILAKLRDSD DA
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