Gene Plim_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4056 
Symbol 
ID9140776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5210242 
End bp5210529 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003632066 
Protein GI296124288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000879203 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCT TCGCGATGTT GGCAGTGACG GCTCTTATGT TTTCGGGGAT GGGTGCTGTG 
GCGGAAGCTC AGTGGGGTTA TCGACCTGTG CGCGTGAATC CAAGGTATCC TGTGCGGGTT
TCAACACCGA CATATTTTGT GCCGGTTTCG CAAGAGCCAG TGCGGGTTTC ACGCAGCCCG
AGAGTGGTTT ACGAGCCCAT GAATGTGGTC TATTCACGCC GACGGCCCAT TCTCGGTGGG
TATTCGGTCC GTGTACGACC TGCTTACCGC CGCATGGTGA TGTGGTAA
 
Protein sequence
MKFFAMLAVT ALMFSGMGAV AEAQWGYRPV RVNPRYPVRV STPTYFVPVS QEPVRVSRSP 
RVVYEPMNVV YSRRRPILGG YSVRVRPAYR RMVMW