Gene Plim_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4002 
Symbol 
ID9140722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp5136963 
End bp5137679 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID 
ProductMethyltransferase type 11 
Protein accessionYP_003632012 
Protein GI296124234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.708878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC TCTGGCACAT GATTGTGCGG CAAGGTCGCG GGCAGACACA CGAAGAGCGG 
CTCGAAGATT TTTATAAAGG TCAGGCCTCT GGCTACGACT CTTTCCGCAA ACGATTGCTG 
CACGGCAAAA AGGATCTGTT CGACCAGTTA CCGGCACCTC CAGGTGGTGT GTGGGTCGAT 
CTGGGCGCAG GAACGGGAGA AAACGCAGAG AACTGGGGCG AGCGGCTTCA AGAGTTTTCG 
AACGTCTACC TGGTCGATCT CTCCAGTTCG TTGCTCAAAG TCGCTCAGGC ACGCATTGAG 
CAGCGCGGCT GGCAGAACGT CAAGGCGATT CATCACGACG CCACAACCTT TTTGCCACCA 
GAAGGTACAG CTGATGTGGT GACGTTTTCG TACTCGCTGA CGATGATCCC GGATTGGCAT 
AAAGCGGTCG ACCAGGCCAT TCGGATGCTG AAGCCAGGGG GTGTGCTGGG AATTGTCGAT 
TTCTATGTCA GCCGTAAATA TCCGCCCGAA GGCAATGTGC GTCATGCGTG GTCGACCCGT 
CACTTCTGGC AGATCTGGTT TGCGACAGAC AATGTCTTTC TTTCGGGCGA TCATTTGCCC 
TACCTGCAAA GCCATCTGGA GACAGTCGTC CTCAGCGAGC GGCGTGGCAA AGTGCCTTAC 
ATGCCGTTTG TCAGAGCACC GCATTATGTC TATGTCGGTC GTAAGCCGTT GGTCTGA
 
Protein sequence
MKILWHMIVR QGRGQTHEER LEDFYKGQAS GYDSFRKRLL HGKKDLFDQL PAPPGGVWVD 
LGAGTGENAE NWGERLQEFS NVYLVDLSSS LLKVAQARIE QRGWQNVKAI HHDATTFLPP 
EGTADVVTFS YSLTMIPDWH KAVDQAIRML KPGGVLGIVD FYVSRKYPPE GNVRHAWSTR 
HFWQIWFATD NVFLSGDHLP YLQSHLETVV LSERRGKVPY MPFVRAPHYV YVGRKPLV