| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3995 |
|---|
| Symbol | |
|---|
| ID | 9140715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 5126414 |
|---|
| End bp | 5127649 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_003632005 |
|---|
| Protein GI | 296124227 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACG TCAACGACAA TTATCTGAAG CTCAAGGCTG GTTACCTGTT TCCCGAGATT
GGCCGTCGTG TCTCCAAATT TGCCAAGGAA AATCCTCAGG CAAAGGTCAT TCGTATGGGA
ATCGGCGATG TCACCGAGCC ATTGCCCGCC GCCTGTATCT CCGCCATGCA CAAAGCTGTT
GATGAAATGG CGAGCCGGGA AACATTTCGA GGGTACGGCC CCGAACAAGG CTTTGATTTC
CTGCGAGAAG CGATTGCTAA ACATGACTTT CAGTCACGTG GTGCCCAGGT TCAGGCCGAC
GAAGTTTTTG TTTCTGATGG TTCGAAGTGT GATACGGGCA ACATTCTCGA CATTCTTGGC
AAGTCGAATG TGATTGCCGT GACCGATCCT GTTTATCCGG TCTATGTCGA TACCAACGTC
ATGGCAGGCC ATACAGGCGA AGCAGATGCT GGTGGTCGTT ATGCCGGTCT GGTTTATCTG
CCGATGACTG AGGCCAATCA GTTCGTACCG GCCCTTCCTG AGCAGAAGGT CGATATTGTC
TACCTGTGCT CGCCGAATAA TCCGACGGGT ATGGCTGCTT CGCGATCAGC ACTGGAGAAG
TGGGTCGATT ACGCCCGCAA GAACGAAGCC ATTATCTTCT TTGATGCCGC TTATGAAGCA
TTTATCACCG AAGCCGATGT GCCTCACTCG ATTTTCGAGA TCGAAGGAGC TCGCGAATGT
GCCATCGAGT TTCGCAGCTT CAGTAAGACG GCCGGTTTCA CCGGAACCCG TTGTGCCTTT
ACCGTCGTTC CCAAAGGTTT AACGGCCCGC ACATCGACTG GTGAAAAGGT GGAACTCCAC
GGCCTCTGGA ATCGCCGCCA CACCACAAAA TTCAATGGTG TCTCGTACAT TGTTCAGCGG
GGTGCCGAAG CTGTCTATAC TCCTGAGGGA CAATCGCAGG TGCGGCAGCT TGTCGAGTTC
TATCTCGAAA ATGCCCGTCT CATGTGTGCT GGTCTTAAGC AGGCCGGGCT GACCGTTTAT
GGCGGTGTGA ATGCCCCTTA CGTCTGGTTG AAAACACCGA ATGGACTCAG CAGTTGGGAC
TTCTTCGATC AATTGTTGTC GAAGGCACAT CTGGTCGGTA CGCCGGGCTC TGGCTTTGGT
GCCTCCGGTG AAGGTTACTT CCGCCTAAGT GCCTTTAACA GCCGGGCCAA TGTGCTGGAA
GCGATTGAAC GCGTCAACAA GTTTGTGCAA GGATAG
|
|---|
| Protein sequence | MAYVNDNYLK LKAGYLFPEI GRRVSKFAKE NPQAKVIRMG IGDVTEPLPA ACISAMHKAV
DEMASRETFR GYGPEQGFDF LREAIAKHDF QSRGAQVQAD EVFVSDGSKC DTGNILDILG
KSNVIAVTDP VYPVYVDTNV MAGHTGEADA GGRYAGLVYL PMTEANQFVP ALPEQKVDIV
YLCSPNNPTG MAASRSALEK WVDYARKNEA IIFFDAAYEA FITEADVPHS IFEIEGAREC
AIEFRSFSKT AGFTGTRCAF TVVPKGLTAR TSTGEKVELH GLWNRRHTTK FNGVSYIVQR
GAEAVYTPEG QSQVRQLVEF YLENARLMCA GLKQAGLTVY GGVNAPYVWL KTPNGLSSWD
FFDQLLSKAH LVGTPGSGFG ASGEGYFRLS AFNSRANVLE AIERVNKFVQ G
|
|---|
| |