Gene Plim_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3848 
Symbol 
ID9140566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4949004 
End bp4949918 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content56% 
IMG OID 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_003631859 
Protein GI296124081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAACA ATTCCCAGCC TTTCAACTCC CCCTCTCGCC CGGCGGTCAC CCAAAGCCAT 
CTCCCTGGCA TGACACCCCG CCAGGGCAAG GTTCGAGATG TTTACGACTT TGGCAATCAG
CTCCTGTTCG TCGCCACGGA TCGCATCAGT GCCTTTGACT GGATCCTCCC CACAGGCATT
CCCGATAAAG GAAAACTCCT CACGCAGATG AGTTGCTTCT GGTTCGATCT GCTGAAGGTT
CGCCATCATC TGGTCTCCAC CAACCCGGCC ACATTGCCCT TACCCGCCGG TACAGACCTT
TCCTTGCTCG AAGGTCGCAG CCTCGTCGTA CAGAAAACCA GAGTCATTCC CATCGAGTGT
GTCGTGCGTG GCTATCTGGC CGGAAGTGGC TGGAAGGAAT ATCGCGCTTC ACAGACAATC
TGTGGAATTT CACTCCCACC GGGACTTGTC GAATGTGACA AACTCCCCGT GCCAATCTTC
ACCCCCGCTA CGAAAGCCGA AAGTGGCCAC GACGAGAACA TCTCCTTTGA ACAGATGCAG
CGGGATATCG ATCCACAGCT CGCCGAAAAG CTTCGCGACC TCAGCCTCTC CATCTACCGG
CAGGCAGCCG ATTACGCCTT GAAAAAGGGA ATCGTGCTGG CCGATACCAA ATTCGAGTTC
GGTCTATTGG GCGAAGAAAT CATCCTCATC GATGAAGTCC TCACGCCCGA CAGTTCGCGC
TTCTGGCCTC TCGATCAATA TCGGCCCGGC CATGGCCAGC CTTCGTTCGA TAAGCAGTTT
GTTCGCGACT GGCTCGAAAC CCAGCCGTGG GACAAAAACT CCCCACCTCC TCCACTCCCG
GAAGATGTCG TACTCCAAAC CAGGGCCAAG TACGTCGAAG CCTACGAACG ACTCACAGGA
AGCACTTTTT CATGA
 
Protein sequence
MTNNSQPFNS PSRPAVTQSH LPGMTPRQGK VRDVYDFGNQ LLFVATDRIS AFDWILPTGI 
PDKGKLLTQM SCFWFDLLKV RHHLVSTNPA TLPLPAGTDL SLLEGRSLVV QKTRVIPIEC
VVRGYLAGSG WKEYRASQTI CGISLPPGLV ECDKLPVPIF TPATKAESGH DENISFEQMQ
RDIDPQLAEK LRDLSLSIYR QAADYALKKG IVLADTKFEF GLLGEEIILI DEVLTPDSSR
FWPLDQYRPG HGQPSFDKQF VRDWLETQPW DKNSPPPPLP EDVVLQTRAK YVEAYERLTG
STFS