| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3815 |
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| Symbol | |
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| ID | 9140533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4902195 |
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| End bp | 4903598 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003631826 |
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| Protein GI | 296124048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.142559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGCTGG TGAACACCAC TTCCTCGCCA CGAGAAGCTG AGCGGCAAAC TTCGTTGCCC
GATCATCTCT CCTCGGCGGG TGCCCATCGC GCCGTCATTT TGCTTGCCTG GCCAGTCCTG
TTAGAGCAGG TGCTGCATTT TTCGGTCGGG TTCTTCGATG TCTACCTTTC TGGTCGACTG
GGGCAGGAGG AAACCGCCGC CATTGGCATG GCGGCTTATG TCAGTTGGCT GGGTTCGATG
ATTTTCGGCC TGGTCGGAGT GGGAGCCACC GCACTCATCG CCAGGTTCTG GGGAGCCCAT
CAATTTGATG AAGCCCGCAC GATCATTTCG AGAGCCATGG CACTGGCGAT CTGCCTGGGG
ATATCGGTTT CTTGCGTCCT GTTCACAATG GCCCCCGGCA TTGTCTGGCT GTTAGGACTC
TCGGGAGAAT CCGTCCAGAT TGGTGTGACT TACCTGAGAA TCGACGCCAT CGGTCAGATC
TTTTCCGCCT GGGTGCTGGT GGGAGCAGCG AGTCTGCGAG GCGCCGGCGA TATGCGCACT
CCGCTCTATG TGCTCTGTCT CACAAGTGTC GTTAACATCG TCCTTTCCAC AACCTTTGTC
TATGGCTTGG GGCCTGTTCC CACGCTGGGA GTCAATGGGA TCGTCTACGG AACCGTCTGT
GCCCAATTCA CTGGCGCTCT GCTCATGGCC TGGTTTCTGA CATCTGGCAG AACAGTCCTC
CAGATCGTCT ACAAAGAGTT TCTGATCCGG CGGGAAAGCA CCTGGCGACT GATGCGCATC
GGCGGGCCTG CTGCTCTTGA TGGCGTCGCC ACCTTCACGG GACACTTTCT GTTTCTCATG
ATTATATCCC GACTCACCGA CGGAGAAGCG GCCTTTGCGG CTCATATTAT CGGCGTGCGA
GTGGAAGCGT TGTCGTATCT GCCAGCAGTC GCCTTTGGTA TTGCCAGCGG AAGCCTGGCC
GGTCGCTACC TTGGTGCACA ACGACCCGAT CTGGCTCGTG CCTGTGGCTT TGCTGCTGTC
GGTCAGGCCG TCGCATATGC CGCCCTGATG TCCGTCCTGT TCTTTACTTT CGCACCGCAG
ATCTACGCCC AGATGCACAT TGACCCGCTC GTGCAGACAA TTGGCGTCGA TCCCTTCAGA
CTGATGGCCT GCTATCAGAT TCCAAACGCG ATTCTGATTG TCCTGGTCAG TACCTTGCGG
GGTTCGGGAG ATACAAGGTT TCCCCTATGG TGCGCCTTTC TGGGGACTTT CTTTGTCAGA
GTCCCCTTGG CGTGGTATCT GGGAATTGGT CTTAACTACG GCTTGTTTGG TGCCTGGATC
GGCATGGGAG CTGATAACAT TCTTCGATGT GGCCTGATCA GTTGGCGCTA CCTGGCCGGG
CGATGGATTC ATGTCAAAGT CTAG
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| Protein sequence | MQLVNTTSSP REAERQTSLP DHLSSAGAHR AVILLAWPVL LEQVLHFSVG FFDVYLSGRL
GQEETAAIGM AAYVSWLGSM IFGLVGVGAT ALIARFWGAH QFDEARTIIS RAMALAICLG
ISVSCVLFTM APGIVWLLGL SGESVQIGVT YLRIDAIGQI FSAWVLVGAA SLRGAGDMRT
PLYVLCLTSV VNIVLSTTFV YGLGPVPTLG VNGIVYGTVC AQFTGALLMA WFLTSGRTVL
QIVYKEFLIR RESTWRLMRI GGPAALDGVA TFTGHFLFLM IISRLTDGEA AFAAHIIGVR
VEALSYLPAV AFGIASGSLA GRYLGAQRPD LARACGFAAV GQAVAYAALM SVLFFTFAPQ
IYAQMHIDPL VQTIGVDPFR LMACYQIPNA ILIVLVSTLR GSGDTRFPLW CAFLGTFFVR
VPLAWYLGIG LNYGLFGAWI GMGADNILRC GLISWRYLAG RWIHVKV
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