Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3576 |
Symbol | |
ID | 9140294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4607007 |
End bp | 4607492 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003631588 |
Protein GI | 296123810 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGT TTTTTGCCGC TGTCTTGTCG TTGGCTGTTG TTTTGGGAGC TTCGTCATTT GCCGCTGCCC AGGACAAGAA GGATATCGTG GATACTGCGG TAGGTGCAGG CAGCTTCAAA ACGCTGGTCG CTGCCGTCCA GGCGGCTGAT CTGGTGGATA CATTGAAGAG CAAGGGACCA TTCACTGTCT TTGCACCGAC CGACGAAGCT TTCGCCAAGC TTCCCAAAGG TACGGTGGAA TCGTTGCTGA AACCCGAAAA CAAGGAGAAA CTGATTGCTA TCCTGACCTA TCACGTGGTC CCCGGCAAAG TTATGGCCAA AGACGTTGTC AATCTCACCG AGGCGAAGAC AGTGCAAGGT TCTGCCGTGA AAATTGCTGT TGAAGGTGGC AAAGTGAGCG TCGGCGGTGC GAACGTGGTG AAGACCGATA TTGTGACCAG CAATGGCGTC ATTCACGTGA TCGACGCAGT CATGTTGCCC AAGTAG
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Protein sequence | MKLFFAAVLS LAVVLGASSF AAAQDKKDIV DTAVGAGSFK TLVAAVQAAD LVDTLKSKGP FTVFAPTDEA FAKLPKGTVE SLLKPENKEK LIAILTYHVV PGKVMAKDVV NLTEAKTVQG SAVKIAVEGG KVSVGGANVV KTDIVTSNGV IHVIDAVMLP K
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