Gene Plim_3465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3465 
Symbol 
ID9140183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4481853 
End bp4483280 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content55% 
IMG OID 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_003631477 
Protein GI296123699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGCCA TGCGGACGAA AGTTGCTGAT TGCCTGAAGA AAACTGCTCC TGGAACGATT 
GTCGATGTGC GTGGCTGGGT GCGAACGCGG CGGGAGTCGA AACAGGGGTT TGCCTTCATT
GAACTCAATG ATGGAAGTTC GTTTGCCAAT CTGCAGATTG TGGCCGACAA GTCGCTGCCG
GATTACGAGG AATTGATCAA GCTGGTGCAG ACCGGGGCGA GTCTGGCAGT GACAGGGGAA
CTCAAGGAGT CGCCAGCGCA AGGGCAGAAG GTGGAACTGC ATGCCCGGAC TTTGAGAGTG
CTGGGACAGG CCGATGCCGC GAAGTACCCG CTGCAGAAGA AGGGGCACAG CTTCGAGTTT
CTGCGGGAAA AAGCTCATTT GCGGCCGCGC ACCAATACGT TCGGTGCAAT GGCTCGCGTA
CGCAATGCGA TTTGCGACGC CATTCATCGC TACTTTCAGG ATCGCGGTTT TCTTTACATT
CACGCGCCGA TCATCACGAC GAGTGATTGT GAGGGAGCCG GTCACATGTT TCAGGTGACA
ACGCTCGATC TGGCAAAACT GGGACAGTTG CAGGGTTCCA GAAGCAGTGA AGCTGGCAAG
CCTTTCGAGA TTGATTACAC GAAAGACTTT TTTGGCAAGA AAGCCGGTCT GACAGTGAGT
GGTCAGCTCG AAGGCGAGAT CTTTGCCTGC TCTGTGGGGG ATTGCTACAC GTTTGGGCCG
ACGTTCCGGG CAGAGAACAG CAATACCACC CGGCATCTGG CCGAGTTCTG GATGATTGAG
CCAGAGATGC CCTTCTATGA GCTGGAAGAC AACATGGCTC TGGCCGAGGA CTTTGTCCGG
TCAGTGATCA AGAATGTGCT GGCGCGCTGC CCGGATGATC TGCAGTTCTT CAATGATCGC
ATTGAGCCGA CGCTGCTGGC GACACTCGAG AACATTTCGG GACATGACTT CATCAAGCTG
ACATACACCG AGGCGGTCGA GATCCTGCTG AAATCGGGAC AGAGCTTTGA GTATCCAGTC
GGCTGGGGGA AGGATCTGCA ATCGGAACAT GAACGGTTTC TGACCGAGAA ACACTTCAAG
CAGCCAGTGA TCCTGACGGA TTATCCGCGA GAGATTAAAT CATTCTACAT GCGGGCGAAC
GATGACGGGA AAACCGTCCG GGCCATGGAT GTGCTTGTCC CTGGAATTGG CGAAATCATT
GGTGGGAGTC AGCGTGAAGA GCGACACGAA GTCCTCATCA GCCGCATGCA GGAATGCGGT
TTGAATCCGG CCGATTACTG GTGGTACCTC GAACTGCGGG AGTACGGCAC AGTTCCTCAC
AGTGGCTTCG GGCTGGGCCT GGAAAGAACC GTGCAGATGA TTACCGGCAT GCAGAATATC
CGCGACTGCA TTCCGTTCCC GCGAACCCCG AAATCGGCTG ACTTCTAA
 
Protein sequence
MPAMRTKVAD CLKKTAPGTI VDVRGWVRTR RESKQGFAFI ELNDGSSFAN LQIVADKSLP 
DYEELIKLVQ TGASLAVTGE LKESPAQGQK VELHARTLRV LGQADAAKYP LQKKGHSFEF
LREKAHLRPR TNTFGAMARV RNAICDAIHR YFQDRGFLYI HAPIITTSDC EGAGHMFQVT
TLDLAKLGQL QGSRSSEAGK PFEIDYTKDF FGKKAGLTVS GQLEGEIFAC SVGDCYTFGP
TFRAENSNTT RHLAEFWMIE PEMPFYELED NMALAEDFVR SVIKNVLARC PDDLQFFNDR
IEPTLLATLE NISGHDFIKL TYTEAVEILL KSGQSFEYPV GWGKDLQSEH ERFLTEKHFK
QPVILTDYPR EIKSFYMRAN DDGKTVRAMD VLVPGIGEII GGSQREERHE VLISRMQECG
LNPADYWWYL ELREYGTVPH SGFGLGLERT VQMITGMQNI RDCIPFPRTP KSADF