Gene Plim_3457 details

Gene Information

• Locus tag: Plim_3457
• ID: 9140175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 4472755
• End bp: 4474857
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 55%
• Product: UvrD/REP helicase
• Protein accession: YP_003631469
• Protein GI: 296123691

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACCG ATTCCCCACA GACAGCCAGC CCTCCATCAG TTCCTTTAGC AGATCTTTCC 
CGTTGGCAGC AGGATCTCAA TCCCGAGCAA CGGGCCGCTG CTCAGGCTGG GCCGGCTCCA 
CTGCTCATTA TTGCCGGTGC CGGGACAGGC AAAACCACAA CTCTCGTCCA TCGGGTCGCT 
CATTTGATCG CTACAGGGAT CGACCCTGGC GAAATCCTGC TGCTGACTTT CACTCGTCGA 
GCGGCTGCTG AAATGATCCG CCGGGTCGAG CAACTTCTCG CGGTGGCTGC AAAGTCGCCG 
GGCATTGCAC GCATTCATGG TCGCCATGTC GTCGGTGGGA CGTTCCATGC CATTGCCACC 
AGACATCTGC GTGAATTCGG TCAGTATCTC GGACTCGACG CCGACTTCAC GATTCTCGAT 
CGCAGTGACG CCGAAGATCT GATGAACCAG CTTCGCTCAG AACTCGACAT CACACGCCAG 
GAAAAGCGGT TTCCTCTCAA AGGCACCTGT GTCGAAATCT ATTCCCGCTG TGTTAATACC 
CGTCAGCCCT TAAGCCTCGT TCTGAAAGAG ACTTTCCCGT GGTGTGCCGA GCATGAGGCC 
GGGCTTAAAG CCTTGTTTCA ATTATTCACC CAGCGAAAGG AAGAGCAGCG GATCCTCGAT 
TACGACGATC TCCTTCTTTT CTGGCTGGCA CTCCTGCAGG ATAGCCCTGC TGTCCCACTT 
TTAAGACAGC GGTACAAAGC TGTCCTTGTC GATGAATATC AGGACACCAA TGCCCTGCAG 
GGCGAAATTG TACGGGCACT TCGTCCCGAT GGTCAGGGTC TGACGGTCGT CGGAGATGAC 
GCCCAGTCGA TCTATTCGTT TCGAGCCGCC ACGATTGAGA ACATTCTCCG GTTCGATCAG 
GAATATCCCG GCACCAACGT CCTTACGCTC TCACAAAATT ATCGCAGTTC TCCCGAGATT 
CTCGCAGCCA GTAATCTCGT GATGTCACTG GCGACCGAAG GCCGCAAAAA GCAACTATGG 
ACCAACCGTC CACCACAAGG GAAGCCGCTA CTCGTCAATT GCCGCGACGA CAATGAGCAG 
AGCACACTGG TCGCCGAGCG CATTCTGGAA CTGCGAGAAA TGGGGGTTTC CCTCAAAGGA 
CAGGCCGTCC TTTTTCGTGC TTCGCATCAC AGCGCCACTC TCGAAATTGA ACTCTCTCGC 
CGAAATATTC CCTTCATCAA GTTTGGCGGG CTGAAGTTCG TCGAAGCAGC TCATGTGAAA 
GATGCCATGG CCATGCTGAG GCTGGCCGAA AATCCGCGAG ACATTGTCTC CGCACTGCGT 
GTGTTATTGC TGCTGCCCGG GATTGGCCCT AAAACGGCCC GTCAACTGAC AGAACGCCTG 
GGATCAGGGA GTTCTGCCTT TGAACCCTGG CGCGAACATA CCCCAGCCGC AGCGACGAAA 
ATTCATTGGC CGGTCTTTGT GGCTCTGTTA CGGACGTTGG TCAAAGGTGG TCAAACCACA 
ACTCCTCTTC CCCTGCAACT CGCGCAGGTT CGCCAGTTTC TCGCTCCCCT GTTAGAACAG 
AAGTACGATC ACGCACCCGC TCGCCTGCGC GATCTTGAAC AACTCGAAAT CATTGCCGCC 
CGGTATGAAT CCCGCAGTCA ATTTCTCGCA GAACTGACTC TCGACCCACC CACTTCCACG 
CAGGATTTTG CTCAAGACCC ACTGCTCGAT GAAGACTGGA TCACACTCTC AACGATTCAT 
TCTGCGAAAG GTCTTGAATG GGATGCCGTC TATGTTCTGC ATGCGGCTGA CGGAAACATC 
CCGGCCGATA TGGCGACACG CAACCCGCGC GAAATCGAAG AAGAGCGCCG CCTGTTTTAC 
GTCGCTCTCA CGCGCGCGAA AACGCATCTG CAGGTTTATC ATCCACAGCG ATATTACTTT 
CACGGCAAGA ATCAGTCAGA CCGCCACAGC TACTCCCAGC GCACCCGCTT CCTGCCGGAT 
GACATTCTGA CAGCCTGGCA AGTCGTCACA CCCCGCATTC AAGAGCCTGC AAGTCAAACC 
CACATCGCCA ACGGACTGAC AACCGCCGAT GTCCGCAAAA AAATCGGCCG CATGTGGGAA 
TAA 

 

Protein sequence

MTTDSPQTAS PPSVPLADLS RWQQDLNPEQ RAAAQAGPAP LLIIAGAGTG KTTTLVHRVA 
HLIATGIDPG EILLLTFTRR AAAEMIRRVE QLLAVAAKSP GIARIHGRHV VGGTFHAIAT 
RHLREFGQYL GLDADFTILD RSDAEDLMNQ LRSELDITRQ EKRFPLKGTC VEIYSRCVNT 
RQPLSLVLKE TFPWCAEHEA GLKALFQLFT QRKEEQRILD YDDLLLFWLA LLQDSPAVPL 
LRQRYKAVLV DEYQDTNALQ GEIVRALRPD GQGLTVVGDD AQSIYSFRAA TIENILRFDQ 
EYPGTNVLTL SQNYRSSPEI LAASNLVMSL ATEGRKKQLW TNRPPQGKPL LVNCRDDNEQ 
STLVAERILE LREMGVSLKG QAVLFRASHH SATLEIELSR RNIPFIKFGG LKFVEAAHVK 
DAMAMLRLAE NPRDIVSALR VLLLLPGIGP KTARQLTERL GSGSSAFEPW REHTPAAATK 
IHWPVFVALL RTLVKGGQTT TPLPLQLAQV RQFLAPLLEQ KYDHAPARLR DLEQLEIIAA 
RYESRSQFLA ELTLDPPTST QDFAQDPLLD EDWITLSTIH SAKGLEWDAV YVLHAADGNI 
PADMATRNPR EIEEERRLFY VALTRAKTHL QVYHPQRYYF HGKNQSDRHS YSQRTRFLPD 
DILTAWQVVT PRIQEPASQT HIANGLTTAD VRKKIGRMWE