Gene Plim_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3377 
Symbol 
ID9140093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4370654 
End bp4371322 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID 
ProductAppr-1-p processing domain protein 
Protein accessionYP_003631389 
Protein GI296123611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.590192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCA GTTCCCAAGA CGAAAGACCC TTGAAGATCA TTCTCGCGGC CATTGAGCAC 
GATCTCGCCG ATGCCTGGGA GCAGCATTGT GGCGATCTTC CTGGCGTCTC CATTCATCGC 
GGATCGATCC TTGATCTTGC GGTTGATGCC GTGGTCAGTC CGGCCAACAG CTTCGGGTTC 
ATGGATGGCG GGATCGATCT CCGCTACTCC GAGCGCTTCG GTTGGGAGCT TCAGCAACGG 
CTGCAGGAGT TGATTCGCAC CAGGCATCAT GGAGAACTGC TCGTCGGTGC TGCCGAGATT 
GTCGAAACGA AATCCAATCA CATCCCGTAC GTCATCGCGG CCCCCACAAT GCGGGTGCCG 
ATGATTCTTA CCGAGACGGT CAATCCTTAC CTCGCCGCCC GGGCAGTGCT ACTCCTCATT 
CGGCATGGCA TTGTACCCAC GGGGATTCTG GCAGGCGAAC CGGTGGCCTC AGCCGTGCAA 
ACGGTCGCAT TTCCGGGATT GGGGACTGGG ATTGGTCGTG TCGGCCCGAA CACCTGCGCC 
CATCAGATGC GGGCCGCCAT CGAAGAGGTG CTCCTCGAAC GCTGCGACTT CCCCCACACC 
TGGGCTGAAG CCCAACAACG GCATCAACTC CTTTACACCG ACCGCATTCG AAATCTCCAG 
CGGGACTAG
 
Protein sequence
MASSSQDERP LKIILAAIEH DLADAWEQHC GDLPGVSIHR GSILDLAVDA VVSPANSFGF 
MDGGIDLRYS ERFGWELQQR LQELIRTRHH GELLVGAAEI VETKSNHIPY VIAAPTMRVP 
MILTETVNPY LAARAVLLLI RHGIVPTGIL AGEPVASAVQ TVAFPGLGTG IGRVGPNTCA 
HQMRAAIEEV LLERCDFPHT WAEAQQRHQL LYTDRIRNLQ RD