Gene Plim_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3372 
Symbol 
ID9140088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4366131 
End bp4366835 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content57% 
IMG OID 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_003631384 
Protein GI296123606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.884853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCC TTCTGATCGC GGATATTCAT GCCAACTTTG TGGCCCTTTC CGCCATTCAG 
GAATCGTTCG ACGCCTGCCT GTTTCTCGGA GATGCCGTCG AATACGGCAC AGATTCAGCC 
CCTTGCCTCG ATTGGATCAG AGGGCATGCA ACAGCCGTCG TACGGGGCAA TCACGATCAT 
TCAACGGCCC AGAGAGTGCA ATCACAAGGG GCCTCTCCTT TACGAAGGCT GGCAGCCGCC 
ACACGAGCGA TCAACGAACG TGTGCTCACC GCTTCACACC GCAAGTTTCT CTCGCAGATG 
CCACTGACGA GAAGTCTCGA ACTCGACGGC CAGAAGTTTT TCCTCGTGCA CGCGACTCCA 
CGCGACCCCA TGGATGAGTA CCTGCCCGAG GATGCTCATG CCTGGCAACA GCGGCTCTCC 
TTTATCGAAG CCGACTTTGT GTGCGTAGGC CACACCCACA AGCCGATGCA GCTGGATCTC 
GGCCAGACAC AAGTGATCAA CCCCGGCAGT GTGGGCCAGC CGCGCAATGG AGTTCCTGAG 
GCACATTACG CCATTATCGA GCAGGGAAAA GTCTCCTTCC GGACAGTCCC CTACGATATC 
AGCCGGGCCG TGGAGCAGAT GCGAGAAGCA GGGCTGGAAG AATCGCTGAT TGAGCTTTCG 
GAGCATTTGT TGAGAACTGG CGGATCACTT CCCGCGAGTG TGTGA
 
Protein sequence
MRILLIADIH ANFVALSAIQ ESFDACLFLG DAVEYGTDSA PCLDWIRGHA TAVVRGNHDH 
STAQRVQSQG ASPLRRLAAA TRAINERVLT ASHRKFLSQM PLTRSLELDG QKFFLVHATP 
RDPMDEYLPE DAHAWQQRLS FIEADFVCVG HTHKPMQLDL GQTQVINPGS VGQPRNGVPE 
AHYAIIEQGK VSFRTVPYDI SRAVEQMREA GLEESLIELS EHLLRTGGSL PASV