| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3275 |
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| Symbol | |
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| ID | 9139990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4226878 |
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| End bp | 4229925 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | PAS sensor protein |
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| Protein accession | YP_003631287 |
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| Protein GI | 296123509 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.991698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCAGA CGAAGCGGAG AATCACATCA ATCAACCTCG TCCTCGTGAT CGTCTTACTG
GCTGTCAACG GGTTCGTCAC CAGTGTGAAT ATCGGTCGGC TGTTCGATGC CCAGCGGGAT
GTCTCGCACA CTTTTGAAGT GCTGAGACTG CTGGCCAATC TGCAGGAAGA AATGGTGACG
TTTGAATCGA GTTGCCGGGG TTTTGTAATC GCCAGAGAAT CGACTTACCT CGATAGCGGC
CTGGTCGCAC TTGAGCAACT CCCTCGAACT TATGCGGATC TTTCGGATCA ACTGGCTGAT
AATCCCGAGC AAACCCGACG TTTAGTCGAA CTCGCACCAA TCATTGCCGA GAGACTGGGA
GTGGCTGCCA ATGCGATTCA GGTTTTTATC GAATCTGGTG AAGCGGAATT GATGAAGATT
GCCAGGACAG GCCGAGCCCG TGTGCAGATG GATGAAATCC GCTCGCGCGT GGCTGAGATG
ATTCAGGCCG AAAGGACATT GCTGGATCAG CGTTCGGCTG GCGTGGAGTT CAATTACTAC
GTGGCCATCA TGACGACGTT ACTGGCCGTG CTGATCTCAA CAGGAGTGGC AATTGGTGCC
TGGAGATCCA TCGATCAGGA ACTGGCCGCC AGAATTGTGG CCGAGCAGTC GGCTCGTCTG
ACAAGCGAAA ACTTTCGTGT CACAATTCAC AGTGTGGACG ATGCATTGGT GACAACCGAC
GCCCAGGGCC GTATCACGTT GATGAATGAA GTTGCAAAGT CGCTCATTCA AGTAAGCGAT
GATGTGCTCG GGCAGCCGGT TGATCGAATT TTTCAGATCC AGCAGGATTC TGGCACGACA
GCCAATGAGC ACCCGGTGCA TCAGGTTCTT CGAACGGGCC AGAAACTGGC TGCCACGGAA
ACCAACTGGC TCATCAGGGC TGATGGGACA CGTGTTGCCG TCGATGATCG GGCTTCGCCG
ATTCGTAATT CCAAAGGGAA GCTGCAGGGG ACAGTCCTCG TTGTGCGGGA TATCTCGGAA
AAGCTCAAAG CGGCACAGGC CATTCGACGT CGTGATGAGC GTTTTCGCAG AGTGTTCGAC
AGCAGTCTGG TGGGTATGGC GCTGTGCAAC AAGTATGGTC GCATTATTGA TGCGAACGAA
ACTTACCTTG AAACGATTGG TTATTCGCGA GAAGGGCTTT ATAGCGCTGA CCTGAGTTGG
GGCGATATCA CACCCACGCA GTTTTCGGGA TTGGATACCG GCGCCTGGGA AGAGTTACGA
GCCACAGGTC GCTGCCGACC GTTCGAGAAA GAGTTTATCG CACAAAACGG CATGCGGGTT
CCAGTGCTGA TTGCCGCTGT CAAATTGCTT GATGACGAGG AAAGTGAGGT GGCGATCTAC
ACCGTCAACC TGTCACAACT GCGGGCTGCC GAACAGCGTT ATCGGATGCT CACCAATGCC
TCGCCACAGA TCGTCTGGAT TGCCCGGCCC GGCGAAGACA ATCTTTACTG CAATGACCGC
TGGTACGAAT ATACAGGGCT GACACCCGAC GAAACCCGTG GCATGGGCTG GCTGCGTGCT
GTCCCAACAG AACATCAGGG ACAGGTCGCG CGTGAATGGT CGACGGCTTC CCGCAAGCCG
GAAACCTGTG AGTTTGAACT TCCACTCCGC GGAAGAGATG GATTGAGCCG GTGGCATTTA
TTGCGAGGGG TTCCACAAAT CAACAGCGAT GGCGTCGTGG TGGAAATGAT CGGCACCATG
ACCGACATCG ACGCGCTGCG TCAGGCTCAA CAGGAGCTTG AACTTGCCGA TCGCAGGAAG
GATTTTTTTC TCGCCACGTT GTCACACGAA TTGAGAAATC CACTGACACC GATTTCGAAT
GCTCTGGAAG CATGGCGGGC TGCAGATTTA TCTCCCGAAG AACTGACAGA AGTGCGTGAG
ATGCTCAGTC GCCAGACAAA GCAGATGGTG CGCCTGATCG ACGATCTACT GGATGTTTCA
CGCATCAGTG GGGGAAAAAT CCAGTTAAAG CCAGCCATTC TTGATCTTCG TGAATGCATC
CAGACGTCCA TAGAAGTCGC CCAGCCGCTG ATTCGACAGG CGGGTCATCA GTTGACCACC
GACTTACCGA ACGAACCTGT CTGGATTAAG GCCGATGCCA CACGCATCGT GCAGATCGTC
GCCAACCTGT TGAACAATGC GGCCAAGTAC ACCGATCCCC AGGGCAGGAT TCACCTCCAG
GTCGTGCCGT TTGAGCATCA GGTGGAAATT CAGGTCGTTG ATAACGGTGC AGGAATCCCG
GCACACATGC TGGAACAGAT TTTCGGCATG TTCGAGCAGG TGGGAAGTTC GCTTGATCGA
GCTCAAGGGG GTTTGGGGAT TGGTCTGACG TTGGTTCGCT CACTGGCAGA ACTGCATGGC
GGAAGTGTGG TGGCCTTCAG CGAAGGACTC GGCAAGGGAA GTCGATTTAC CATCACTTTG
CCCCGGTCCC CGGCACCTGT CGCCATTGAA CCTCCAGTGA ATAACAATTC CACCGAAAAG
CCTGAGAATT CGGCAAAGGC AGACGGCCAT CTGTCCAGCG ATCGTGAAGA CACAGCCACT
CAGATCAACA CGTTGAACAC CAATGGATCT CTGCAGGATC AAACTGCAGA ACAACCGGCG
GGCAATTTAC GCATCATGAT CGTGGATGAT GTCGCTGCCA GTGCGAAAAC TCTCGGGATG
ATGCTGCGCG CGATTGGACA GCCTGCGGAA ATCTGTCTCG ATGGTCATGA AGCGATCCAG
CGAGTTCTTG CCAATCCTCC CGATCTGGTC TTTCTCGATA TCGCCATGCC CGGGATTGAT
GGTTATCAGG TCGCCCGACA GATTCGCGCG CAATGCCCCC AGCGCCCGGT CCTGGTGGCA
CTCACTGGTT TTGGCCAACC CGATGATCGC AAGCGCACAC AGGCTGCGGG ATTCAATCAG
CATCTGACGA AACCCACCAG CCTTGACTCT CTGCGGGCAC TGCTTAAGCA TTATGGAAGT
TCTGAGCGGC CCAGTGAGTC AGTCAGAAGT GATACTCATG CGGACTGA
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| Protein sequence | MPQTKRRITS INLVLVIVLL AVNGFVTSVN IGRLFDAQRD VSHTFEVLRL LANLQEEMVT
FESSCRGFVI ARESTYLDSG LVALEQLPRT YADLSDQLAD NPEQTRRLVE LAPIIAERLG
VAANAIQVFI ESGEAELMKI ARTGRARVQM DEIRSRVAEM IQAERTLLDQ RSAGVEFNYY
VAIMTTLLAV LISTGVAIGA WRSIDQELAA RIVAEQSARL TSENFRVTIH SVDDALVTTD
AQGRITLMNE VAKSLIQVSD DVLGQPVDRI FQIQQDSGTT ANEHPVHQVL RTGQKLAATE
TNWLIRADGT RVAVDDRASP IRNSKGKLQG TVLVVRDISE KLKAAQAIRR RDERFRRVFD
SSLVGMALCN KYGRIIDANE TYLETIGYSR EGLYSADLSW GDITPTQFSG LDTGAWEELR
ATGRCRPFEK EFIAQNGMRV PVLIAAVKLL DDEESEVAIY TVNLSQLRAA EQRYRMLTNA
SPQIVWIARP GEDNLYCNDR WYEYTGLTPD ETRGMGWLRA VPTEHQGQVA REWSTASRKP
ETCEFELPLR GRDGLSRWHL LRGVPQINSD GVVVEMIGTM TDIDALRQAQ QELELADRRK
DFFLATLSHE LRNPLTPISN ALEAWRAADL SPEELTEVRE MLSRQTKQMV RLIDDLLDVS
RISGGKIQLK PAILDLRECI QTSIEVAQPL IRQAGHQLTT DLPNEPVWIK ADATRIVQIV
ANLLNNAAKY TDPQGRIHLQ VVPFEHQVEI QVVDNGAGIP AHMLEQIFGM FEQVGSSLDR
AQGGLGIGLT LVRSLAELHG GSVVAFSEGL GKGSRFTITL PRSPAPVAIE PPVNNNSTEK
PENSAKADGH LSSDREDTAT QINTLNTNGS LQDQTAEQPA GNLRIMIVDD VAASAKTLGM
MLRAIGQPAE ICLDGHEAIQ RVLANPPDLV FLDIAMPGID GYQVARQIRA QCPQRPVLVA
LTGFGQPDDR KRTQAAGFNQ HLTKPTSLDS LRALLKHYGS SERPSESVRS DTHAD
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