| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3236 |
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| Symbol | |
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| ID | 9139951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4178674 |
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| End bp | 4180347 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_003631249 |
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| Protein GI | 296123471 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000356342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACA AGTACTCGTC ACGAATCACC CAGCCACGCT CGCAAGGTGC CTCTCAAGCC
ATGCTCTACG CCACAGGCAT GAGCCGCGAA GATATGGATA AAGCCCAGGT TGGCATTTCG
AGTGTGTGGT ACGATGGCAA CCCGTGCAAC ATGCACCTCA ATAAGCTGGC CGACAAGGTG
AAAGAGGGCG TCGTAGCCGC CGGCCTCGTG GGCATGAGAT TCAACACCAT TGGCGTTTCC
GATGGCATCT CGATGGGCAC CAATGGGATG TCGTTCTCGC TGCAGTCGCG CGATCTGATT
GCCGACAGCA TCGAAACGGT CATGTCGGCC CAGTGGTACG ACGCCAACAT TTCGCTTCCC
GGTTGCGATA AAAACATGCC TGGCTGCATC ATGGCCATGG CTCGACTCAA CCGCCCATCA
CTCATGGTTT ACGGCGGCAC CATCCGGGCA GGTTGTACTC CGCGACATCC CAAGCTCGAT
ATTGTCTCGG CCTTCCAGGT TTATGGCGAA TACCTCGCTG GTAAGCTGAG CGACGAAGAG
CGGCAGGAAG TCATCGAACA TGCCTGTCCC GGTGCCGGTG CCTGCGGCGG CATGTACACC
GCGAATACGA TGGCCAGTGC GATCGAAGCT TTGGGAATGT CATTACCCTA CAGTTCATCG
ATCCCGGCGG AAGATCCTCT CAAAATGGGA GAATGCCTCG CCGCAGGCAA GGCTATTCGC
ACTTTGCTCG AAAAGGATAT CAAGCCCTCA GATATCATGA CGCGAGCCGC CTTCGAGAAT
GCCATGGTGA CCATCATGGC CACCGGGGGT TCAACGAACG CCGTCCTCCA CTTGATTGCC
ATGGCTCGCG CGATTGGCGT CTCGCTCACC ATCGACGACT TCCAGAAGGT TTCAGATCGC
GTGCCCTTCA TCGCTGATCT CAAACCGAGT GGTAAATACG TCATGGAAGA CCTGCACAAC
GTGGGCGGAA CTCCCGCGGT CCTCAAATAT CTGCTCGAAA AAGGCTTGCT GGATGGCAGT
TGCCTGACGG TGACTGGCAA GACCTTGGCC GAAAACCTGG AGCCACTCCC CGGTCTGGCG
GAAGGCCAGC GCGTGATTGT GCCAATTGAG ACACCCATCA AAGAGACTGG CCACATCCGC
ATTATGCGCG GCAACTTCTG CCCGGACGGG GCTGTCGCCA AGATCACTGG TAAAGAAGGG
CTCGTCTTCA AAGGCCCCGC TCGCTGCTAC GATCAGGAAG AAGCGATGCT CAAGGGGCTG
GAAAACAACG AGATTCAGAA GGGTGATGTG ATCATCATCC GCTACGAAGG GCCGAAGGGC
GGGCCAGGTC TTCCCGAAAT GCTCACCCCG ACCTCCGCCA TTATGGGAGC CGGTTTAGGG
AGTGATGTCG CACTGCTGAC CGACGGCCGC TTCAGTGGTG GATCACACGG ATTCATCGTC
GGCCACGTGA CACCCGAAGC CCAGGAAGGG GGCCCGATCG CCCTCGTGAA AAACGGCGAC
ATCATTACCA TCGACGCCGA GAAAAACAGC ATCGACGTCG ATTGGACAGA AGCCGACTAC
CAGGCCCGCA AAGCCGCCTT CGTCGCCCCA CCCTACCTCG CCACCCGCGG CACATTATAT
AAGTATATTA AGAACGTGAA AAACGCGAGC GAAGGCTGCG TGACAGATGA GTAG
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| Protein sequence | MLNKYSSRIT QPRSQGASQA MLYATGMSRE DMDKAQVGIS SVWYDGNPCN MHLNKLADKV
KEGVVAAGLV GMRFNTIGVS DGISMGTNGM SFSLQSRDLI ADSIETVMSA QWYDANISLP
GCDKNMPGCI MAMARLNRPS LMVYGGTIRA GCTPRHPKLD IVSAFQVYGE YLAGKLSDEE
RQEVIEHACP GAGACGGMYT ANTMASAIEA LGMSLPYSSS IPAEDPLKMG ECLAAGKAIR
TLLEKDIKPS DIMTRAAFEN AMVTIMATGG STNAVLHLIA MARAIGVSLT IDDFQKVSDR
VPFIADLKPS GKYVMEDLHN VGGTPAVLKY LLEKGLLDGS CLTVTGKTLA ENLEPLPGLA
EGQRVIVPIE TPIKETGHIR IMRGNFCPDG AVAKITGKEG LVFKGPARCY DQEEAMLKGL
ENNEIQKGDV IIIRYEGPKG GPGLPEMLTP TSAIMGAGLG SDVALLTDGR FSGGSHGFIV
GHVTPEAQEG GPIALVKNGD IITIDAEKNS IDVDWTEADY QARKAAFVAP PYLATRGTLY
KYIKNVKNAS EGCVTDE
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