Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3117 |
Symbol | |
ID | 9139831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4036782 |
End bp | 4037318 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_003631131 |
Protein GI | 296123353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.129541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACACG CTCACTCCAC AGAAGAACTC TTTGATGTGG TCAACGAGGC TGACGAAGTG ATCGACGTCT TGCCCAGATC AGTCGTCCAT GCCCGTAAGC TCTGGCATCG CGCGGTTCAT GTCCTGGTCT TTAACTCAGC GGGCGAACTG CTGATTCATC AGCGGTCAGC ACAAAAAGAT GAGGAGCCAC TCACCTGGAA CTCCTCCTGC TCAGGCCATG TCTCGGCAGG AGAAGATTAC GACCTGGCCG CCAGACGTGA ACTTCAGGAA GAGCTAGGGC TCGACACACC CATCGAAACG ATCGGACAGC TCCCAGCCTC GCCCAAACTC GCTTACGAAC ACACACGAGT TTATCGCACG GTCACCGACC AGCCACCTGT CTTCGATCCC GGCGAAATTG CACAGGGCTG CTATCGCACT CTCCCCGAAA TCATGGCCGA CGTCGCTGCC CGGCCATCAG TCTATTCCCA GCCATTTCGC ACGATTCTCG CGTGGTACCA GGCAGAGCAC CTCAACAAAC CATCGCCAAA GATTTAG
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Protein sequence | MEHAHSTEEL FDVVNEADEV IDVLPRSVVH ARKLWHRAVH VLVFNSAGEL LIHQRSAQKD EEPLTWNSSC SGHVSAGEDY DLAARRELQE ELGLDTPIET IGQLPASPKL AYEHTRVYRT VTDQPPVFDP GEIAQGCYRT LPEIMADVAA RPSVYSQPFR TILAWYQAEH LNKPSPKI
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