Gene Plim_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3117 
Symbol 
ID9139831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4036782 
End bp4037318 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content56% 
IMG OID 
ProductNUDIX hydrolase 
Protein accessionYP_003631131 
Protein GI296123353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.129541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACG CTCACTCCAC AGAAGAACTC TTTGATGTGG TCAACGAGGC TGACGAAGTG 
ATCGACGTCT TGCCCAGATC AGTCGTCCAT GCCCGTAAGC TCTGGCATCG CGCGGTTCAT
GTCCTGGTCT TTAACTCAGC GGGCGAACTG CTGATTCATC AGCGGTCAGC ACAAAAAGAT
GAGGAGCCAC TCACCTGGAA CTCCTCCTGC TCAGGCCATG TCTCGGCAGG AGAAGATTAC
GACCTGGCCG CCAGACGTGA ACTTCAGGAA GAGCTAGGGC TCGACACACC CATCGAAACG
ATCGGACAGC TCCCAGCCTC GCCCAAACTC GCTTACGAAC ACACACGAGT TTATCGCACG
GTCACCGACC AGCCACCTGT CTTCGATCCC GGCGAAATTG CACAGGGCTG CTATCGCACT
CTCCCCGAAA TCATGGCCGA CGTCGCTGCC CGGCCATCAG TCTATTCCCA GCCATTTCGC
ACGATTCTCG CGTGGTACCA GGCAGAGCAC CTCAACAAAC CATCGCCAAA GATTTAG
 
Protein sequence
MEHAHSTEEL FDVVNEADEV IDVLPRSVVH ARKLWHRAVH VLVFNSAGEL LIHQRSAQKD 
EEPLTWNSSC SGHVSAGEDY DLAARRELQE ELGLDTPIET IGQLPASPKL AYEHTRVYRT
VTDQPPVFDP GEIAQGCYRT LPEIMADVAA RPSVYSQPFR TILAWYQAEH LNKPSPKI