Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3053 |
Symbol | |
ID | 9139765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3947205 |
End bp | 3948989 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_003631073 |
Protein GI | 296123295 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACG CGTTGCCAAT CACGAGGCCT CTGAGTCTGC AAGATCTGCT GGAAGGCTTC GGATCGGTCT CCGCGCCGCC TTCGAAAGGC GAGCAGATGG TTCACCGACT GTTGCAAAAA CAGCGGGAGC TCTCGGCCGT CGAACTCTTC GCAAAGGAGC ACGCCGGTGG GACGATCAAC GGCAGCAAAT TACCCGATCA GGCCCGTTTC TATGCCAGTC TGCTGCCTGC GACGCCCGTG GGCCCGGGGC AGCAGTACGG CTTCGAAGTC GATCTCGATC GCTGTTCGGG TTGTAAGGCC TGTGTGACAG CTTGCCACTC TCTGAACGGG TTGGATGATT CGGAGACTTG GCGCGATGTA GGATTACTCA TCGGCGGAAC CGAGACGCTT CCCGTGATGC AGCATGTGAC AGCCGCCTGC CATCATTGCC TTGAACCGGC CTGCATGACC GCCTGCCCGG TAAACGCCTA CGAAAAAGAC GCCTTCACGG GTATCGTCCG GCATCTCGAT GATCAATGCT TCGGCTGCCA ATACTGCACG CTGGCCTGTC CCTACAACGT CCCCAAGTAC CACGCTGCCA AGGGGATCGT CCGCAAGTGC GACATGTGTT CCAACCGCCT GAAAAATGGC GAAGCACCGG CCTGTGTACA GGCATGCCCT CATGAGGCCA TCTCTATCCG AATCGTCGAT GTGTCGCGGG TCACCGAAAA TGCGGAGGCA GACCACTTCC TCCCCGCTGC TCCCGAACCT TACATCACTC TACCGACAAC CACGTACAGG ACGACGCGGG TCTTTCCCCG CAATATGCTC CCGGCGGATT ACTATTCGGT CAGCCCGCAA CATCCCCATT GGCCATTAAT CGTGATGCTG GTGCTGACAC AGCTTTCGGT TGGAGCATTC GCAGCGGGCA GTTTCCTGGA AGAGGCACTT GATACAGAAC TCGCCACCGC TTTTCGTCCC ATTCATGCAA CAGGCGCACT CGTGCTGGGT TTGCTGGCAC TGGGAGCCAG CACGCTTCAT CTGGGACGGC CACTCTACGC TTTCCGAGGG ATTCTGGGAT TTCGGCATTC CTGGCTCAGC CGGGAAATCG TGGCCTTTGG ATTATTTGCA GGTCTCGCTG TACCGTTTGC CGGGCTTTGC TGGGGATTGC CACTGCTGGA GGTCTCGGGC AGTCCCTGGG GGAAACTGGC TGGTGAACTC CTCCCGACAT TGTCACCGAG TGTCGCGTGC GTGGGAGTTA TCGGTGTCTT CTGTTCGGTG ATGATCTACG TCTTCACCAG AAGGGAACTC TGGTCGCTGG AGCGAACTTT GATCCGCTTT AGCCTCACGA CGATACTTCT GGGCGTGGCG ACAATCTGGC TGATGATGTG GCTGGCCGTT GGTTTTTTGA GCGATGACGA GTGGCATCAG CTTGCTCAAA ACTTGACTCG CCCTTTGGCC CGCTCGGTAA TCATCCTGAC CACACTCAAG CTGCTTTACG ACATCTCGCT GCTGCGGCAT CTGGCGACAT TCCGCAATTC GCCGCTCAAG CGATCGGCAC TCCTGGTTGT CGGCCCGCTG AGAGGTTTTT CCATCGGACG GCTCGTGTTG GGAGTCGTTG GAGGCGTGGT CATCCCCGCA GCCTTTGCGG CCGTTCCGAT TCATGACCCG ATCCAGTTCA CAACGACATC GGCCGTTTTC GTGGGGCAGA TGTGGGTTGC CTGCCTGGGG GGAGAATTGC TCGAGCGTTA TCTGTTCTTC TCCGCTGTGT CGAACCCGCG TATGCCCGGA GGAGTGCGTT CATGA
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Protein sequence | MSDALPITRP LSLQDLLEGF GSVSAPPSKG EQMVHRLLQK QRELSAVELF AKEHAGGTIN GSKLPDQARF YASLLPATPV GPGQQYGFEV DLDRCSGCKA CVTACHSLNG LDDSETWRDV GLLIGGTETL PVMQHVTAAC HHCLEPACMT ACPVNAYEKD AFTGIVRHLD DQCFGCQYCT LACPYNVPKY HAAKGIVRKC DMCSNRLKNG EAPACVQACP HEAISIRIVD VSRVTENAEA DHFLPAAPEP YITLPTTTYR TTRVFPRNML PADYYSVSPQ HPHWPLIVML VLTQLSVGAF AAGSFLEEAL DTELATAFRP IHATGALVLG LLALGASTLH LGRPLYAFRG ILGFRHSWLS REIVAFGLFA GLAVPFAGLC WGLPLLEVSG SPWGKLAGEL LPTLSPSVAC VGVIGVFCSV MIYVFTRREL WSLERTLIRF SLTTILLGVA TIWLMMWLAV GFLSDDEWHQ LAQNLTRPLA RSVIILTTLK LLYDISLLRH LATFRNSPLK RSALLVVGPL RGFSIGRLVL GVVGGVVIPA AFAAVPIHDP IQFTTTSAVF VGQMWVACLG GELLERYLFF SAVSNPRMPG GVRS
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