Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3022 |
Symbol | |
ID | 9139734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3914802 |
End bp | 3916727 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631043 |
Protein GI | 296123265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.329411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTC CTGCTGAATC GCCTACTCCC GAAGAAATCT CGCCGGTCTT TCGACTGAGT GACAAGACCA CGCTCTTCCC GGTCATTCAC GAGAGCGGTG ATTTCTCCGT CGCTATTCGC CGGTTTTTAC TACACCACAG CTTCGATTGC CTCGCTGTGC CGCTGCCACC TTCCTTTGCC GAAGCTGTCG AGCAGGCCAT TCTGCAATTG CCTTCGGTTT CGATTGTCCT GCAGCGGGAA ACCGCCATTC CGACTGTGAG ATCGTGGACA CCACCTGCTG AGACGCGGGA TGACGATGAA CAGCCGGAAT TTTTTACCCG TGCCGCCAGC TATGTGCCGG TTGAACCTTG CCAACCAGTC ATTGCCGCTC TTCGTGCAGC CATGGAAGAA CGGATTCCCC GGGCATTCAT CGACCTCGAA ACCGATCACT TTGAATGTCA TACCGCCGTC TATCCCGATC CTTACTCACT CAAGCATACG ACTCCTGAAG CGTTTGCTGC AGCCATTCTC CCTGCGATTC CTCCACCACC GGGAGAACAA GCCTACGCCC GCATTCATAC CATGGCTCAT CGCCTGCACG AACTCGAACA GCGGTACAAC TCGATTCTCT GTATCTGCTC GCTGACAGAT TGGCCATGGA TTCGCAAAGC GTACCAGGAT CGCCTCCCCC AAGTGACAGA CGACCAGGTG GAATCGGTCG AAACGTTTGC AGTCACTCCG GAAACACTAC ATTTCATGAT GGGTGAGCTG CCCTATATCA CCGGTCTTTA TGAGCGGGCA CGAGCCGAGT TGGAATCCGA TGAGAACCTG AGCATCGACG GCGTCAAAAC CATGCTGCTC GCGACACGCG ATGAATATCG CGAAGACCTG GGTTCCCGCG CACGCAAGAT TACCCCTAAG CTTCTCAAGA CGTACTTTCA GTATGTCCGT AATCTCACAC TGATTCAGAA ACATCTCACT CCTTCGCTCT ATACGCTGAT CTCAGCGGCT CAGCAGATTG CTGGAGATCT GTTTGCCGTG CAACTGGCCG ATGTGGCTCA GCAGTACGGC TATCCACCTC TGGACGGTGT TCCCCCTTTG CGCATGGGCA TCAATAAAGC CGCCCTGCCG GATGGAACTT TCTATGGCAT GAAAACGCGT CTGCCTGGTC AGACCCGGGT CTGGTGTACC CTAAAGCTCA CACCCAAGCC ACCTCAACTC CAGCAGCAGG ATTGGCAGTC GCGATGGAAT CCATTTCGCC AGTGCAGCTG GCCACCAGAA GATCTGGCGA TCGAGAAATT CCGCACGCAT ATCAAGGATT CTGCAATCGC GTTAATGGGT GCTGATCTGG CCCGCAGTGA AAAGTTCACA ACCAGTTTGA AGGATGGTCT CGATATGCGC GAGACGCTTC GCAACTGGCA TTCGGGAGAG TTGTATGTTC GTATTAATCC GCCCGCCCGC GGGAATCTCG ATTGCGTGAT TATGCTGTTT GATTCCCCCG CCGACCCGCG CACTTATCCC TGGCGGGTGA CGTGGCATGC CGAGCATCAC GATGAATCGA CGCTTTCACT CTTTGCGACC GATTACCGCG CCAGTATGCA AGGCCCGGGG ATTGGCATGG CGACTTATGG CGGTGCCATG TTTTTATTTC CGCCCCGGCC GATTCCCGAT ATCTGGCGGT CGAGGCATTT CGATCATGCC GACACTCTTG AAGAGCGGTT GATTATGGCG GCTTGTCATT ACTCGCGGGA AAAGCATATC GCCATGCTCA GCCCCCTTCC CCCCGGGTTG GCATGGAAGA AGATTGCCCA GCGCTACGGC AAAAAACTGA TCCACCTGCC CCTTTCGAGA TTCAGCCAGG AGACAATCGA AAAGCTCCGC GTCTTCCATG TACTTAATGG AACCAGCGTT CGCAGCTACG CCGCTCATTT TATCCGCAAA GGCTGA
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Protein sequence | MSRPAESPTP EEISPVFRLS DKTTLFPVIH ESGDFSVAIR RFLLHHSFDC LAVPLPPSFA EAVEQAILQL PSVSIVLQRE TAIPTVRSWT PPAETRDDDE QPEFFTRAAS YVPVEPCQPV IAALRAAMEE RIPRAFIDLE TDHFECHTAV YPDPYSLKHT TPEAFAAAIL PAIPPPPGEQ AYARIHTMAH RLHELEQRYN SILCICSLTD WPWIRKAYQD RLPQVTDDQV ESVETFAVTP ETLHFMMGEL PYITGLYERA RAELESDENL SIDGVKTMLL ATRDEYREDL GSRARKITPK LLKTYFQYVR NLTLIQKHLT PSLYTLISAA QQIAGDLFAV QLADVAQQYG YPPLDGVPPL RMGINKAALP DGTFYGMKTR LPGQTRVWCT LKLTPKPPQL QQQDWQSRWN PFRQCSWPPE DLAIEKFRTH IKDSAIALMG ADLARSEKFT TSLKDGLDMR ETLRNWHSGE LYVRINPPAR GNLDCVIMLF DSPADPRTYP WRVTWHAEHH DESTLSLFAT DYRASMQGPG IGMATYGGAM FLFPPRPIPD IWRSRHFDHA DTLEERLIMA ACHYSREKHI AMLSPLPPGL AWKKIAQRYG KKLIHLPLSR FSQETIEKLR VFHVLNGTSV RSYAAHFIRK G
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