Gene Plim_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3022 
Symbol 
ID9139734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3914802 
End bp3916727 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631043 
Protein GI296123265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.329411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTC CTGCTGAATC GCCTACTCCC GAAGAAATCT CGCCGGTCTT TCGACTGAGT 
GACAAGACCA CGCTCTTCCC GGTCATTCAC GAGAGCGGTG ATTTCTCCGT CGCTATTCGC
CGGTTTTTAC TACACCACAG CTTCGATTGC CTCGCTGTGC CGCTGCCACC TTCCTTTGCC
GAAGCTGTCG AGCAGGCCAT TCTGCAATTG CCTTCGGTTT CGATTGTCCT GCAGCGGGAA
ACCGCCATTC CGACTGTGAG ATCGTGGACA CCACCTGCTG AGACGCGGGA TGACGATGAA
CAGCCGGAAT TTTTTACCCG TGCCGCCAGC TATGTGCCGG TTGAACCTTG CCAACCAGTC
ATTGCCGCTC TTCGTGCAGC CATGGAAGAA CGGATTCCCC GGGCATTCAT CGACCTCGAA
ACCGATCACT TTGAATGTCA TACCGCCGTC TATCCCGATC CTTACTCACT CAAGCATACG
ACTCCTGAAG CGTTTGCTGC AGCCATTCTC CCTGCGATTC CTCCACCACC GGGAGAACAA
GCCTACGCCC GCATTCATAC CATGGCTCAT CGCCTGCACG AACTCGAACA GCGGTACAAC
TCGATTCTCT GTATCTGCTC GCTGACAGAT TGGCCATGGA TTCGCAAAGC GTACCAGGAT
CGCCTCCCCC AAGTGACAGA CGACCAGGTG GAATCGGTCG AAACGTTTGC AGTCACTCCG
GAAACACTAC ATTTCATGAT GGGTGAGCTG CCCTATATCA CCGGTCTTTA TGAGCGGGCA
CGAGCCGAGT TGGAATCCGA TGAGAACCTG AGCATCGACG GCGTCAAAAC CATGCTGCTC
GCGACACGCG ATGAATATCG CGAAGACCTG GGTTCCCGCG CACGCAAGAT TACCCCTAAG
CTTCTCAAGA CGTACTTTCA GTATGTCCGT AATCTCACAC TGATTCAGAA ACATCTCACT
CCTTCGCTCT ATACGCTGAT CTCAGCGGCT CAGCAGATTG CTGGAGATCT GTTTGCCGTG
CAACTGGCCG ATGTGGCTCA GCAGTACGGC TATCCACCTC TGGACGGTGT TCCCCCTTTG
CGCATGGGCA TCAATAAAGC CGCCCTGCCG GATGGAACTT TCTATGGCAT GAAAACGCGT
CTGCCTGGTC AGACCCGGGT CTGGTGTACC CTAAAGCTCA CACCCAAGCC ACCTCAACTC
CAGCAGCAGG ATTGGCAGTC GCGATGGAAT CCATTTCGCC AGTGCAGCTG GCCACCAGAA
GATCTGGCGA TCGAGAAATT CCGCACGCAT ATCAAGGATT CTGCAATCGC GTTAATGGGT
GCTGATCTGG CCCGCAGTGA AAAGTTCACA ACCAGTTTGA AGGATGGTCT CGATATGCGC
GAGACGCTTC GCAACTGGCA TTCGGGAGAG TTGTATGTTC GTATTAATCC GCCCGCCCGC
GGGAATCTCG ATTGCGTGAT TATGCTGTTT GATTCCCCCG CCGACCCGCG CACTTATCCC
TGGCGGGTGA CGTGGCATGC CGAGCATCAC GATGAATCGA CGCTTTCACT CTTTGCGACC
GATTACCGCG CCAGTATGCA AGGCCCGGGG ATTGGCATGG CGACTTATGG CGGTGCCATG
TTTTTATTTC CGCCCCGGCC GATTCCCGAT ATCTGGCGGT CGAGGCATTT CGATCATGCC
GACACTCTTG AAGAGCGGTT GATTATGGCG GCTTGTCATT ACTCGCGGGA AAAGCATATC
GCCATGCTCA GCCCCCTTCC CCCCGGGTTG GCATGGAAGA AGATTGCCCA GCGCTACGGC
AAAAAACTGA TCCACCTGCC CCTTTCGAGA TTCAGCCAGG AGACAATCGA AAAGCTCCGC
GTCTTCCATG TACTTAATGG AACCAGCGTT CGCAGCTACG CCGCTCATTT TATCCGCAAA
GGCTGA
 
Protein sequence
MSRPAESPTP EEISPVFRLS DKTTLFPVIH ESGDFSVAIR RFLLHHSFDC LAVPLPPSFA 
EAVEQAILQL PSVSIVLQRE TAIPTVRSWT PPAETRDDDE QPEFFTRAAS YVPVEPCQPV
IAALRAAMEE RIPRAFIDLE TDHFECHTAV YPDPYSLKHT TPEAFAAAIL PAIPPPPGEQ
AYARIHTMAH RLHELEQRYN SILCICSLTD WPWIRKAYQD RLPQVTDDQV ESVETFAVTP
ETLHFMMGEL PYITGLYERA RAELESDENL SIDGVKTMLL ATRDEYREDL GSRARKITPK
LLKTYFQYVR NLTLIQKHLT PSLYTLISAA QQIAGDLFAV QLADVAQQYG YPPLDGVPPL
RMGINKAALP DGTFYGMKTR LPGQTRVWCT LKLTPKPPQL QQQDWQSRWN PFRQCSWPPE
DLAIEKFRTH IKDSAIALMG ADLARSEKFT TSLKDGLDMR ETLRNWHSGE LYVRINPPAR
GNLDCVIMLF DSPADPRTYP WRVTWHAEHH DESTLSLFAT DYRASMQGPG IGMATYGGAM
FLFPPRPIPD IWRSRHFDHA DTLEERLIMA ACHYSREKHI AMLSPLPPGL AWKKIAQRYG
KKLIHLPLSR FSQETIEKLR VFHVLNGTSV RSYAAHFIRK G