Gene Plim_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2958 
Symbol 
ID9139670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3828966 
End bp3829775 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID 
Productcytochrome c oxidase subunit II 
Protein accessionYP_003630979 
Protein GI296123201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGG CAGCCTTGGC AGTGGCTTTG TGCCTGGCTG CGCCGTCACT AGGCTGGTGG 
TTTCCGGATA CTGGCGAGGC GATGTCGAGC ATTGGCCGCC GGATTGATGG GCTGTTTTAT
ATCATTTTGT GGATCACCAG TATTGTCTTC GTAGGGACTC AGATTGCACT GGGTTATGTA
CTTTGGAAGG GGGCTGTTAA GCCTGCCCAC GAGAAAGCGA CGTACTCCCA TGGTAATCAT
ACCCTGGAAG TGATCTGGAC GGTGATCCCC GGGATCGTGC TGTTGTTCAT TGCGATCTAT
CAGATGGATG TCTGGGCGGC TTTCCGTATG CGGAATTATG CCCCGGGGGA AATTGAAGCG
ATTGCCGAAG TGACCGCTCG TCAATTCGAG TGGCGGATTC GTTATCCCGC TCCCGGCAAG
CCACTGATGC CCATGCCTCA GCCCGATGAT GTTTATACCG TGAACGACCT GAGGATCCCG
GTGGGGAGGC CGGTCTCCAT CAGTTTGAGA TCAGGCGATG TCCAGCATTC GTTTTTTGTG
CCTGTATTGC GTATCAAGCA GGATGCCTTG CCGGGAACTG TCATTCCCGT CTGGTTCGAT
GCACTTCAGC CGGGAAGCTA TGACCTGGTC TGTGCTGAGT TGTGCGGTTG GGGCCACTAC
AAAATGAAAG CCCGAGTTTT AGCGACTTCA GAAGAGTTAT TTCAAAAGTG GAAGCAGGAA
GCGGTGCTGC TCCAGGCAGA TGACGGACTC CGTTTGGCCA GCCCACCGCA AAATACGGCC
GCTGATCAAG CCCAGACTTC GACTCCTTAA
 
Protein sequence
MSWAALAVAL CLAAPSLGWW FPDTGEAMSS IGRRIDGLFY IILWITSIVF VGTQIALGYV 
LWKGAVKPAH EKATYSHGNH TLEVIWTVIP GIVLLFIAIY QMDVWAAFRM RNYAPGEIEA
IAEVTARQFE WRIRYPAPGK PLMPMPQPDD VYTVNDLRIP VGRPVSISLR SGDVQHSFFV
PVLRIKQDAL PGTVIPVWFD ALQPGSYDLV CAELCGWGHY KMKARVLATS EELFQKWKQE
AVLLQADDGL RLASPPQNTA ADQAQTSTP