Gene Plim_2862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2862 
Symbol 
ID9139574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3708369 
End bp3709181 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content54% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003630883 
Protein GI296123105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAGC TGGTCGATCT GAAAAAGACA TTTCATCCGG GAACTCCGAA TGAAGTCCGT 
GCTCTGCAGG GGGTGAGCCT CACGATTGAA GAAGGTTCAT TCGTGGTGGT GATAGGCACG
AATGGTTCGG GGAAATCGAC ATTACTCAAC GCGGTCGCAG GGACGTTTCT TGTCGATCAG
GGAAAGATTG AACTGGCAGG TCAGGATGTA ACGGGTTGGC CGGAACATCG CCGGGCGAAG
TTCATCGGCC GGGTGTTTCA GAATCCTTAT ATGGGGTCGG CACCGCATCT TTCGATTGCC
GAGAACCTGG CTTTGTCGGC AAGACGTGGT GATTTTCGTG GCTTGAACTG GGCATTGAAG
CGGCGGCAAC TTGAGGAACT CCAGCAGCGA GTGCGGGAGA TGGGCCTGGG AATGGAGAAC
CGCTTAACGA ACCTGATTGG CAGTCTTTCG GGAGGGCAGA GACAATCGTT GACTTTGCTG
ATGGCAAGCT TGAAGCGTCC TGATCTGTTG CTGCTCGATG AACATACGGC TGCGCTGGAC
CCCAAGTCGG CTGATCAGGT GATTCAACTG ACGGAGAATC TTGTCCGTAA GCAGAAGCTG
ACCACGTTGA TGGTGACGCA CTCGATGCAA CAGGCGGCCA CGCTGGGCGA TCGGTTGATC
ATGATGGTGC GTGGGCAGAT TCGTTACGAC TTTCAAGGGG CTGCGAAAAA GCGACTGACA
CCCGAAGCGA TCTTGAGCAA GTTTGAGGAA GTTCGCCGGA TGGATCTGCT CGATGAATCG
GCTGCGGAAC TTCTGAGACA GAGATATGTG TAG
 
Protein sequence
MLKLVDLKKT FHPGTPNEVR ALQGVSLTIE EGSFVVVIGT NGSGKSTLLN AVAGTFLVDQ 
GKIELAGQDV TGWPEHRRAK FIGRVFQNPY MGSAPHLSIA ENLALSARRG DFRGLNWALK
RRQLEELQQR VREMGLGMEN RLTNLIGSLS GGQRQSLTLL MASLKRPDLL LLDEHTAALD
PKSADQVIQL TENLVRKQKL TTLMVTHSMQ QAATLGDRLI MMVRGQIRYD FQGAAKKRLT
PEAILSKFEE VRRMDLLDES AAELLRQRYV