Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2862 |
Symbol | |
ID | 9139574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3708369 |
End bp | 3709181 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003630883 |
Protein GI | 296123105 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAAGC TGGTCGATCT GAAAAAGACA TTTCATCCGG GAACTCCGAA TGAAGTCCGT GCTCTGCAGG GGGTGAGCCT CACGATTGAA GAAGGTTCAT TCGTGGTGGT GATAGGCACG AATGGTTCGG GGAAATCGAC ATTACTCAAC GCGGTCGCAG GGACGTTTCT TGTCGATCAG GGAAAGATTG AACTGGCAGG TCAGGATGTA ACGGGTTGGC CGGAACATCG CCGGGCGAAG TTCATCGGCC GGGTGTTTCA GAATCCTTAT ATGGGGTCGG CACCGCATCT TTCGATTGCC GAGAACCTGG CTTTGTCGGC AAGACGTGGT GATTTTCGTG GCTTGAACTG GGCATTGAAG CGGCGGCAAC TTGAGGAACT CCAGCAGCGA GTGCGGGAGA TGGGCCTGGG AATGGAGAAC CGCTTAACGA ACCTGATTGG CAGTCTTTCG GGAGGGCAGA GACAATCGTT GACTTTGCTG ATGGCAAGCT TGAAGCGTCC TGATCTGTTG CTGCTCGATG AACATACGGC TGCGCTGGAC CCCAAGTCGG CTGATCAGGT GATTCAACTG ACGGAGAATC TTGTCCGTAA GCAGAAGCTG ACCACGTTGA TGGTGACGCA CTCGATGCAA CAGGCGGCCA CGCTGGGCGA TCGGTTGATC ATGATGGTGC GTGGGCAGAT TCGTTACGAC TTTCAAGGGG CTGCGAAAAA GCGACTGACA CCCGAAGCGA TCTTGAGCAA GTTTGAGGAA GTTCGCCGGA TGGATCTGCT CGATGAATCG GCTGCGGAAC TTCTGAGACA GAGATATGTG TAG
|
Protein sequence | MLKLVDLKKT FHPGTPNEVR ALQGVSLTIE EGSFVVVIGT NGSGKSTLLN AVAGTFLVDQ GKIELAGQDV TGWPEHRRAK FIGRVFQNPY MGSAPHLSIA ENLALSARRG DFRGLNWALK RRQLEELQQR VREMGLGMEN RLTNLIGSLS GGQRQSLTLL MASLKRPDLL LLDEHTAALD PKSADQVIQL TENLVRKQKL TTLMVTHSMQ QAATLGDRLI MMVRGQIRYD FQGAAKKRLT PEAILSKFEE VRRMDLLDES AAELLRQRYV
|
| |