Gene Plim_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2828 
Symbol 
ID9139540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3664764 
End bp3665618 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content57% 
IMG OID 
Productpeptidase M48 Ste24p 
Protein accessionYP_003630849 
Protein GI296123071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACG GAAATCAGCC TCGGCGTCGT GGGTTTCGAG TTCAGATCCT GATTGGACTG 
GCGATTGCCG GGTTTGCTCT GGTGAGGTAC TTCGCCAGTC TGGATGTGAA CCCCGTGACG
GGTGAACGCC AGTTTGTGGC GATGTCGCCT CAACAGGAAT TGGCACTGGG CCAGCAATCG
GCTCCAGAGA TGGCGCGCGA AATGGGGGGC GTGGTTCCGC CCAATGACCC CAGAGCCGCC
ATGGTCCGGC AAGTGGGGCG AAAGCTCGTG GAATCTTCCA AAGCCAAAGA CAGCCCCTGG
CAGTTTCAAT TTCATCTCCT GGCCGACCCG AAAACCATCA ATGCCTTTGC ACTCCCGGGC
GGGCAGATTT TTATCACGAT GGGGCTCTAT TCTCGATTGG AGAACGAAGC TCAACTGGCG
GGTGTCCTGG GGCATGAAAT CGGCCATGTG ATCAATCGAC ACAGTGCCGA GCATATGGCC
AAAGGTCAAT TAGGGCAGAT GCTGGCCACA GCCGCTGGAG TCGCTGCCAG TGACGAAAAC
AGCAGTGGCA GAAATGCTCA GATGGCAGCC ATGGTTGTCC ACCAGATGCT GCAGATGAAG
TACAGCCGGG GAGATGAATC CGAATCGGAT GCGTATGGTC TGGTGGCAAT GGTCGAAGCG
GGGTACGACC CCTCGCAAAT GCTGGGCGTC ATGCGAATAC TGGCGGAGGC CAGCCAGGGG
AACCGTCAGC CCGAGTTTCT GGCTTCGCAT CCGCATCCCG AAAGCCGGGT TCAACAAATC
GAGGCCTGGC TCGAAAAGAA TTATCCAAAG GGCGTGCCAT CAAACCTCAC CGATGGTGGT
TCACTGAATT CTTAG
 
Protein sequence
MSYGNQPRRR GFRVQILIGL AIAGFALVRY FASLDVNPVT GERQFVAMSP QQELALGQQS 
APEMAREMGG VVPPNDPRAA MVRQVGRKLV ESSKAKDSPW QFQFHLLADP KTINAFALPG
GQIFITMGLY SRLENEAQLA GVLGHEIGHV INRHSAEHMA KGQLGQMLAT AAGVAASDEN
SSGRNAQMAA MVVHQMLQMK YSRGDESESD AYGLVAMVEA GYDPSQMLGV MRILAEASQG
NRQPEFLASH PHPESRVQQI EAWLEKNYPK GVPSNLTDGG SLNS