| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2769 |
|---|
| Symbol | |
|---|
| ID | 9139481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3593831 |
|---|
| End bp | 3594757 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_003630791 |
|---|
| Protein GI | 296123013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.243852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAGTTAC AACAATCTGA AAACCGTCTT ATTGTTCAGG CACCCGCCAA ACTCAACCTC
TCTCTGCGGA TTCTCGCGCG TCGTCCCGAT GGTTTTCACG AGATCGAAAC GGTCATGGTT
TCCATCCAGC ATTACGACAC GCTCTCCTTC GCCCCCTCTT CCCAAACTGA CATTTCATTT
CGATTTGAGG ATCTGACGCA TCATCCATTA GCAACCACAA CACATTCGTT CGCGGATGAA
ACGGCTCTTG TCCCTCAGGA TCACACCAAT CTGGTTGTTC GTGCGGCACT CCTGCTGAAG
GAATATGCAA AGGTTGACTG CGGAGCCGAG ATCCTTCTGC AGAAAAGAAT TCCCGCCGCG
GCTGGCCTTG CCGGCGGTTC CAGTAATGCC GCCGCCACGC TGGCTGCTCT CAATCAGTTA
TGGAATCTTC GGTTAACTTT GCAGGAACTT TCTCAGCTCG CGTCACAGTT AGGAAGTGAT
ATTCCCTTCT TCCTTTGCGG CAAACCGATG GCAGTCTGCC GCGGGCGTGG CGAGATCATT
GAGCCTGTCG AACTTCAGGA AAAGCTGTGG TTTGTTGTAG CAAAACCACC AGCTGGGCTC
TCGACAGCAC TCGTCTACCG ACATTGCCAA CCCACCCAGA ATTCTCCCTC AATCGCTCCA
TTGCTCAGCA ACCTGGCGAA GGGAGATCAA ATCAGCGCGG CACATGCTTT GCATAATGGT
CTTCAAGCAG CAGCAGTCGA GCTCTGCCCT GCAATTCGTC AGCTCGAGTC CACTTTTGCA
AACCTTGATG TGATTGCCCA TCAAATGAGC GGAAGCGGGA CTGCTTACTT CGGTTGGTGC
AGAAGCGAAG CGGCAGCTCA CACTGCAGCC CAGCAACTCA CTCACCTGGG ACTGGCACAG
GTCTTCGTGG CTTGCTCCGG ATTGTAA
|
|---|
| Protein sequence | MQLQQSENRL IVQAPAKLNL SLRILARRPD GFHEIETVMV SIQHYDTLSF APSSQTDISF
RFEDLTHHPL ATTTHSFADE TALVPQDHTN LVVRAALLLK EYAKVDCGAE ILLQKRIPAA
AGLAGGSSNA AATLAALNQL WNLRLTLQEL SQLASQLGSD IPFFLCGKPM AVCRGRGEII
EPVELQEKLW FVVAKPPAGL STALVYRHCQ PTQNSPSIAP LLSNLAKGDQ ISAAHALHNG
LQAAAVELCP AIRQLESTFA NLDVIAHQMS GSGTAYFGWC RSEAAAHTAA QQLTHLGLAQ
VFVACSGL
|
|---|
| |