Gene Plim_2762 details

Gene Information

• Locus tag: Plim_2762
• ID: 9139474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3581979
• End bp: 3585386
• Gene Length: 3408 bp
• Protein Length: 1135 aa
• Translation table: 11
• GC content: 54%
• Product: PAS sensor protein
• Protein accession: YP_003630784
• Protein GI: 296123006

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.449168
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCGCA TCCTGATTGT TGAACCACGA CCTTCCTTTC GTGAAGGTCT TCGTCAGACG 
CTGGTTGATG CCGGCTACGA GATTGAGACG CTTGATATCG ATCAGGATCT GCCGGCGGCA 
ATCCAGATCC GCCCGGCTCT GGTGGTTCTC GGTTGTGAAG CCATTGAGTT TCTCCCGCTG 
ATCAAATCTC AGTGCACGCC TCCTGTGCCA GTGCTGCTGC TGATCAAGGC CGGCGAGTTG 
GGATTGATTC TTAAAGCGGT TGATGGAGCG GCTGATCTGA TCTATTCATA CGAACGACCA 
CTGCAGGATG TACTGCAAGG CATCCAGCGA TTGACGAGGC CGCGCAGTGA TGACGTAGTG 
CCACAGTTAT CGCACCAGGA TCGACTGATC GTGGCACTCA GGTCGGTCTG TGATGATCTG 
AATCTGACGC ATAAGCGGCA CATTTCGGAA GTGCTCAAGC GTCAGTATGC CGAGCAGAAG 
CTGGTGGAGT CGGAATCGTT TTATCGGTCT TTAGTGGAGA CATTGCCCTA CGCGATGTTC 
CGTAAAGATC TGCATGGACG AGTGACTTTT GCCAACCGCA AGCTGTGTGA AATCCTCGGT 
TCCCCTCCGA ATGAGGTGGT GGGCAAGACC GATTACGACT TTTTCCCCAC GGATCTGGCC 
GATAAGTACC GGGCTGATGA TCGGTATGTC ACGGAAACGA GAGCACAGTT TGAAACGATC 
GAAGAGTTTG TGACACCTTC GGGAGAGGTG CATTACACAC ATGTGATGAA GAACCCGGTC 
TATGATGGTC GAGGGAATTG CGTCGGGATC CAGGGGATTT TCTCAGATGT GACTGATCGC 
AAACGAACAG AGATCGCTCT CGACCAGGAG CGGGATCTGC TCAATAACCT GATGAAAAGC 
ATCCCGGACA ACATCTACTT CAAGGATGTG CGGGGCAGAT ATCTGCGCAT CAATCAGGCG 
AAAGCCGCCG CGAGCGGATT GTCCGATCCG AGCCTGGCGA TTGGAAAATC GGATACCGAT 
TTCTTCTCAG CAGAGCACGC AGCGATTGCT CGTAAAGACG AAGAATATGT GATGCAGACC 
CGTCTGCCAT TGATTGGTAA GGAAGAACGG GTGGTCTGGA GTGATGGTCA TATCCGGTGG 
ATGTCGACCA CCAAATTGCC GTTGATTTCA CCAGCGGGGG ACGTGATCGG AACCTACGGA 
GTCTCACGCG ATATTACGCC GATGAAGCTG GCTGAACAGG CCTTGCGGGA AGCCAAAGAT 
GCGGCTGAAG CTGCAAACCG GGCGAAGAGT GATTTTCTCG CCAATATGAG CCATGAGATT 
CGCACACCCT TGAATGCCAT TATCGGTATG ACAGAACTGG TGATGGATAC CGATCTGAAG 
GTGGCACAGC GGGATTACCT GCGGATGGTG CTCGAATCGG GTGAATCGCT TCTGGGAATC 
ATCAACGACA TTCTTGACTT TTCGAAGATT GAGGCCGGTC GATTGCATGT CGATGAGCAA 
CCCTTCCGAT TACGCGATTC GCTGGGTGAC ACGATGAAAT CGCTCTCGAA CCGCGCTCAT 
CGCAAGAAGC TCGAGTTGGC GTTTCATGTC TCGCCAGATG TTCCCGATGA GGTTCGCGGA 
GATGCAGTCC GGGTGCGCCA GGTGATCATC AATCTGCTGG GGAATGCACT CAAGTTTACC 
GAACGCGGCG AGGTGGTTCT CGATGTTTCT GTCGAGAGTC GAACTGCAGA ACAGGTGACA 
TTGCATTTCA AAGTGCAGGA TACCGGGATC GGGATTGCCA AAGATAAATT TGAATCCATT 
TTTGAAGCGT TTGAGCAAGC CGATTCTTCG ACCACCAGGC GATATGGAGG GACAGGGCTG 
GGGTTGGCGA TATCGGCCCG GCTGGTGGAA TTGATGCAGG GGAAGATCTG GGTTGAAAGC 
GAAGTGGGTC AAGGTAGTAC CTTTCACTTT ACGCTCAATC TGGGTGTCGA AGCAGAAGGA 
AGTGTGCAGC CACTGGCCCA GGAGCCTCAA CTGCATGGCT TGCGTGTGCT GATTGTCGAC 
GATAACCAGA CGAATCGTAG GATTCTGGAA GAGTTGACGT TGTTGTGGGG GATGCGTCCA 
AGAATTGCCG CAGGAGCGAT CGAAGCCCGG CGAGAGTTGC AGCATGCGAT TGATCAAGGT 
GAACCCATTC GATTGATCAT TACCGATGCG CAAATGCCGG GAGAAGACGG GTTCAGTCTG 
ACGGCATCAA TTCGCAGTCT GGAAAACATG CCTGCCGTTG AAATCCTGAT GCTGACATCG 
GGGGATCGGC TGGAAGATCT CTCGCGGTGT CAGCAACTGG GGATTGCCGG TTATCTCATC 
AAGCCTGTGA AACAATCCGA GTTGTACAAC TCGATTGTAG GGATCATGGG GCAGGCACCT 
CGTGCTGTGC CCATGGCTTC GGCTATGGCT GTGCCGGAAA GATCGGCCAA TTCGCGGAGG 
ATTCTACTGG CTGAAGACAG TCTGGCCAAT CAGAAACTGG CACTGGGTTT ACTGGAGCGA 
TGGGGGCACC GGGTAGTGGT GGCCAGCAAT GGCATCGAGG CGATTGAACG CTATCGCAGT 
GAATCATTCG ACCTGATTCT GATGGATGTG CAGATGCCCG AACTCGACGG GAATGAAGCC 
ACCATGGCGA TTCGCGAGAT TGAAAGGCGG ACGGGAGAAC ATATTCCGAT CGTGGCGATG 
ACAGCGCATG CCCTGCAGGG GGATCGTGAG CAATGCCTGA AGGCCGGAAT GGATGATTAC 
CTGATGAAGC CGATACGGGC TCGTCAGTTG TTTCAGATGA TTGAGCAGGT CTGTAACGAT 
CATGCTCCAC GCTGGAAGCC GCTCTACCAG ATGACCAGTG AGGGTGTGGC GGCAAGAAGC 
GAAGAACATT GTGCTGAAGA GTCTGATCTG GATCAACAGG CGCATGCGGT GGAACCTCAG 
ACGGATTGCC AGTCAGTGAT TGGAGACTCG ATGAATGCAG CCGGTGCGCT CCAGACCATT 
GATGGTGGAG CCGAGTCGGT GGTGAAGTCG GAGGATTATG TTGACTGGCA GTTGGCTCTG 
CGTGCGACAA ATGGAGATCG GGCGCTTCTG GCAGATGTGG GTCAGGCTTT TCTTGAGGAG 
ACACCCTGGC TGCTGAACAA ACTCGATGAC GCGATCACCA CACAGGATAC AAAGCTGTTT 
CAAAGACTCA GCCATACACT CAAAAGTGCC TTTCGAACCT TTGGCGCGAA CAAACTGAGT 
GAGCAGTATG AGCAGATGGA AATGGACGTG AAGCGAGAAG GTCGATTACC CGAGGTCGAG 
GTGGTGGCCA GGTATCGACA ATCAGCCGAT CATGTCGTGG AGCGAATTGC CAAAGAGTTG 
CCACAGGTTT GTGCAGAGAC TGCTTCAGGC TCTGGCAAGG GGATGTGA 

 

Protein sequence

MPRILIVEPR PSFREGLRQT LVDAGYEIET LDIDQDLPAA IQIRPALVVL GCEAIEFLPL 
IKSQCTPPVP VLLLIKAGEL GLILKAVDGA ADLIYSYERP LQDVLQGIQR LTRPRSDDVV 
PQLSHQDRLI VALRSVCDDL NLTHKRHISE VLKRQYAEQK LVESESFYRS LVETLPYAMF 
RKDLHGRVTF ANRKLCEILG SPPNEVVGKT DYDFFPTDLA DKYRADDRYV TETRAQFETI 
EEFVTPSGEV HYTHVMKNPV YDGRGNCVGI QGIFSDVTDR KRTEIALDQE RDLLNNLMKS 
IPDNIYFKDV RGRYLRINQA KAAASGLSDP SLAIGKSDTD FFSAEHAAIA RKDEEYVMQT 
RLPLIGKEER VVWSDGHIRW MSTTKLPLIS PAGDVIGTYG VSRDITPMKL AEQALREAKD 
AAEAANRAKS DFLANMSHEI RTPLNAIIGM TELVMDTDLK VAQRDYLRMV LESGESLLGI 
INDILDFSKI EAGRLHVDEQ PFRLRDSLGD TMKSLSNRAH RKKLELAFHV SPDVPDEVRG 
DAVRVRQVII NLLGNALKFT ERGEVVLDVS VESRTAEQVT LHFKVQDTGI GIAKDKFESI 
FEAFEQADSS TTRRYGGTGL GLAISARLVE LMQGKIWVES EVGQGSTFHF TLNLGVEAEG 
SVQPLAQEPQ LHGLRVLIVD DNQTNRRILE ELTLLWGMRP RIAAGAIEAR RELQHAIDQG 
EPIRLIITDA QMPGEDGFSL TASIRSLENM PAVEILMLTS GDRLEDLSRC QQLGIAGYLI 
KPVKQSELYN SIVGIMGQAP RAVPMASAMA VPERSANSRR ILLAEDSLAN QKLALGLLER 
WGHRVVVASN GIEAIERYRS ESFDLILMDV QMPELDGNEA TMAIREIERR TGEHIPIVAM 
TAHALQGDRE QCLKAGMDDY LMKPIRARQL FQMIEQVCND HAPRWKPLYQ MTSEGVAARS 
EEHCAEESDL DQQAHAVEPQ TDCQSVIGDS MNAAGALQTI DGGAESVVKS EDYVDWQLAL 
RATNGDRALL ADVGQAFLEE TPWLLNKLDD AITTQDTKLF QRLSHTLKSA FRTFGANKLS 
EQYEQMEMDV KREGRLPEVE VVARYRQSAD HVVERIAKEL PQVCAETASG SGKGM