| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2664 |
|---|
| Symbol | |
|---|
| ID | 9139376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3450492 |
|---|
| End bp | 3451457 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003630686 |
|---|
| Protein GI | 296122908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGCA GTAATTCCCT CGCTATTCTA TTGGCTTTCT CAGCATTCAC GGCATGGGGT
TGGCTCTCCG CCAACGAAAC CCAGGCTCAA ACCCAGACTG TCCTGCACAA GACGGTCAAA
GTGGGCGACC TCGACATCTT CTATCGTGAG GCCGGTCCGA AGGACGCGCC GACGATCCTG
CTGCTGCACG GCTTTCCCAC CAGTTCGCAG ATGTTCCGCA ATCTCATTCC CGCTCTGGCC
GACAAGTACC ACGTCATCGC CCCTGACTAT CCCGGTTTCG GCCACAGCTC GATGCCCACC
CACGACAAAT TCACCTACAC CTTCGACAAC CTGGCAAAGG TAATCGACGA ATTCACGCAA
AAGATCGGCC TCACGAAGTA CGCCCTCTAT GTGCAGGACT ACGGCGCGCC GATCGGCTAT
CGTCTGGCCA GTGCCCATCC CGAACGCATC ACGGCGATCG TCGTCCAGAA TGGCAATGCC
TACGATGAAG GGCTCGACAA CGACTTCTGG AAGCCGATCA AGGCCTACTG GAACGATCCC
ACCAGCCAGA CGAAGCGCGA CGCCCTCAAG GGAGTTCTCA ACTACGACGC CACCAAGTGG
CAGTATCTGC ATGGGGTGAA GCAGCCGGAG CGTGTCAGCC CGGATGGAGC TGCCCACGAT
CAGTTTCTCC TCGACCGCCC CGGCAATGCC GAGATTCAGC TCGACATGTT CCTCAGTTAC
GGCAGCAATC CGGCCCTTTA TCCCCGCTGG CAGGAGTATT TCCGTAAGCA CCAGCCGCCG
ATGCTGATCG TCTGGGGAAA GAATGATCAG ATCTTCCCCG CTGCCGGTGC CGAGCCTTAC
AAACGAGACC TCAAGACGCT GGAGTTCCAT CTCCTCGACG CGGGTCACTT TGCCCTGGAA
TCCAACGGCG ACGAGATTGC CCGACTGATG CGTGATTTCC TCGGCAAGCA TGTTGCTCGC
AAGTGA
|
|---|
| Protein sequence | MSRSNSLAIL LAFSAFTAWG WLSANETQAQ TQTVLHKTVK VGDLDIFYRE AGPKDAPTIL
LLHGFPTSSQ MFRNLIPALA DKYHVIAPDY PGFGHSSMPT HDKFTYTFDN LAKVIDEFTQ
KIGLTKYALY VQDYGAPIGY RLASAHPERI TAIVVQNGNA YDEGLDNDFW KPIKAYWNDP
TSQTKRDALK GVLNYDATKW QYLHGVKQPE RVSPDGAAHD QFLLDRPGNA EIQLDMFLSY
GSNPALYPRW QEYFRKHQPP MLIVWGKNDQ IFPAAGAEPY KRDLKTLEFH LLDAGHFALE
SNGDEIARLM RDFLGKHVAR K
|
|---|
| |