Gene Plim_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2652 
Symbol 
ID9139364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3436319 
End bp3437560 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content53% 
IMG OID 
ProductRestriction endonuclease S subunits-like protein 
Protein accessionYP_003630674 
Protein GI296122896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.252104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCTG GATGGATATA CAAGACGCTA GACGACGTTT GCGAATTCAA TAATGGACTT 
TGGAAGGGAG AGAAGCCACC CTTCGTCACA GTTGGCGTAA TAAGGAACAC CAACTTCACG
AAAGAAGGCA CGTTAGATGA TTCCGACATT GCCTATATTG AGGTTGAGGC AAAGAAATTC
GAGAAACGTC GCTTGGTCTT TGGCGACCTA ATCTTGGAGA AGTCGGGGGG GGGGCCGAAG
CAACCAGTAG GACGTGTTGC GCTCTTCGAC AAAAGGGCGG GGGATTTTTC CTTCAGCAAC
TTCACAGCTG CGATACGCGT GAAAGATCCG AAAACGTTGG ACTTCCGCTT TCTGCACAAG
TTTCTTTTCT GGACGCACTT GTCTGGTGTC ACAGAAACGA TGCAGAGCCA TTCGACAGGT
ATTCGAAATC TCAATGGCGA CGTTTACAAA TGCATTGAGG TACCGCTTCC CCCGCTGACC
GAGCAGCGGC GGATTGTGGG GATTCTTGAC GAAGCGTTTG AGGGCCTCGC CACCGCCAAA
GCGAACGCCG AAAAGAACCT CCAAAACGCC CGCGCCCTCT TCGAAAGCCA CCTCCAGGCC
GTCTTCACCC AACGCGGCGA CGGGTGGGTG GAGAAAACTG TGAAGGACGT TGCCTCGCCA
ATCAAAGGCT CAATTCGCAC TGGACCTTTC GGTAGTCAAT TACTGCACAG CGAGTTCGTT
GATGAAGGTA TTGCTGTTCT CGGCATCGAC AACGCCGTCG CCAATGAATT CCGCTGGGGA
AAAAGCCGGT TCATCACGAA AGACAAGTTC GGCCAGCTTG AGCGCTACCG AGTGTATCCC
GGAGATGTGC TGATAACGAT CATGGGAACA TGTGGCCGCT GCGCGGTTGT TCCGGACGAC
ATTCCGACCG CGATCAATAC AAAGCATATC TGCTGCATCA CGCTTGACTG GAAAAAGTGC
TTGCCGAGCT ACCTCCACCT CTACTTCCTA CACGCACAAC AGTCGCAAGC ATTCTTAGCG
AAACATGCCA AGGGCGCAAT CATGGCTGGA CTGAACATGG GCCTAATTCA AGAGCTTCCG
GTATTGCTCC CACCGACTCA GGTTCAGTCA GCAATCGTCG AAGCAGCCAA CGATCTCCGC
GAAGAAACCC AACGCCTCGA ATCCCTCTAC CAGCGCAAGC TCGCCGCGCT CGATGAATTG
AAAAAGTCAC TGCTGCACCG CGCCTTCAGC GGGGAACTGT AG
 
Protein sequence
MKAGWIYKTL DDVCEFNNGL WKGEKPPFVT VGVIRNTNFT KEGTLDDSDI AYIEVEAKKF 
EKRRLVFGDL ILEKSGGGPK QPVGRVALFD KRAGDFSFSN FTAAIRVKDP KTLDFRFLHK
FLFWTHLSGV TETMQSHSTG IRNLNGDVYK CIEVPLPPLT EQRRIVGILD EAFEGLATAK
ANAEKNLQNA RALFESHLQA VFTQRGDGWV EKTVKDVASP IKGSIRTGPF GSQLLHSEFV
DEGIAVLGID NAVANEFRWG KSRFITKDKF GQLERYRVYP GDVLITIMGT CGRCAVVPDD
IPTAINTKHI CCITLDWKKC LPSYLHLYFL HAQQSQAFLA KHAKGAIMAG LNMGLIQELP
VLLPPTQVQS AIVEAANDLR EETQRLESLY QRKLAALDEL KKSLLHRAFS GEL