| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2555 |
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| Symbol | |
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| ID | 9139266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3320743 |
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| End bp | 3323157 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003630579 |
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| Protein GI | 296122801 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.152731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACG TCAGAAAATG GAGTCTGGGA CTGACCGCAT TTCGTCTGCG ACGGGATGGA
GGTTTCCACC TCTTCAAGTT CGGCCTGATG ATTCCCTGTT GCGTAGCCTT ATCTGTTGTG
TCTGGGAACG GACTGGCCGA CACTTTCTTG AAGCGTGCCG CAGCGCAAGA GGTTGCGACA
CCGCCTCCGG TCTCTGAAGA GGCAACCAAG AAAACAGCAG CTTCTGAGGA AACTCAGCCT
GCTGGATCTC CCAAGGTAAC CGCAGGGCCT GTCATTCAAT TGCAAACGTT GGATGAACCG
GCTGTTCCTC TCACTCCTAA AACTCCGCGC ACTGCTGCTG AAGAAAAACA GGCAGAGGCT
TTAGCGTGGT TCATGTCGGG CTCGTTGTTC GAATCTCGAC TGGAGTGGAA GCGGGCCTAC
ACGGCTTACC AGCGGGCTGC GGAACTCAAT CCAGGCTCTG CCGAGACATA TCGCAAGCTG
ATGCAGATTG CATTGATTCA GGAACAACCG GCACAGGCGA TGTCCTGGGC CATGAAAGTT
GTCGATCTTG ATCCTGCCGA CTTTGAAGTT CTCCATACTC TCGCTGCCGG AATGGCTGCC
CAGCAGAAAG GGGCCGAGGC GATCAAGTTT CTGGAACAGG CAGCGAATTC TCCCACACTC
GATCCCCTGT CGAACTGGGC GATCCGGTTA CAGCGCGACC TGGCGATCCT GTATCTGGCG
ACGGGTGATA TTCCCAAGGC AGCCGATAAG TACGAACTGC TGTTGAAAGT GTTTAAGAAA
CCGGATGAGT TCAAACTTGA TCCGAGATTC CGCAACGAAC TGATGAATGA TCCCCGGACC
GGTGCTGAGC GTGTTGCACA GGTTCTCCTG GATGCAGAAC GGGTGGCACC TGCACGAGAA
GCGCTGGAAC TGGCTGTCAA AACCGGTAAG GCCAGCCGGG GAAATGTCAA TTTCTATCAG
GCCAAGCTGC TGCTTCTGGA AGGTAAGCCG GCGGAGGCTC TGGTTGAACT TCAGAAGTAC
ATCGATGCTC AAAGACAATC CAAAGGCCGC GAAGCTTACG AATTGTTGTC GCAGATTCTC
TCCCGCAGTG GTCTTGAGGG AGAGTTGATT GATCGCTTGA CTGCGATTGC CGAGAAAGAC
CAGCGGAATT CGACACTGCA GTTCTTTCTG GCCGAGAAAC TGACGGATCG CGGTGATTAC
GAAAAAGCCG AAAAGATCTA CGAAGCCTCA CTAAAGGGTT CGCGAGATTT AAAAGGATAT
CTGGGGCTTT CGCGTTTGTA TCGTAAGCAG AAAGTGGCAG ATAAACTGTT GGATACGTTA
GGTCGCGGCT TGTCTCAGGC TCCACCGGAT GGTGTGGATG AGATTGAAGC CGAGTTCGAG
TCGGTGGCAA AGGATCGGGA ACTGGTCGGT CTGGTGATTG ATGCAGGCCG TCGGCAGGCC
TCTGCCGAGC CTCGTGAATT GACTTTTGAA GAGGCCTACC TGGTTGCCAA GCTGGCCTCT
CAAGGTGAGC AAATCGATGC TGCAATCGAA TTCTTTCGTA AAGCCAAGGA GATTGCTCCT
GATCGTGGAG GGATTGTGCT TTCCGATCTG GCGGAGATGC TTCTGAAAGC CGACCGCTAT
GCCGATGCTG CTCAAGTTCT GGAAGAAGCC TTGGAAGAGC CTGCGATGGC TGATCGAAAG
CCCAATCTGC TTTTCCAGTT GTCTCAAGCC CGGGAGATGA ATGGGAATAC TGAAGGAGCA
CTGGAAGCGA TTGATCAGGC GATTCGTCTG ATCCCCCAGG CGGCTGTCCT GCAGTTCCAG
AAAGGTTGGA TTTACTATCA CAGTCGCAAT TTCGAAAAGG CAATCGCCCA GTTTGAAACT
GTGCTCCGGG ATTTTCCCGG CGAGACACGA ATTGTGAGGC AGTGCCAATT CAGCCTGTCG
AACATCTATG TCATGCAGGG TGATATTCCA CGAGGGGAAG CGATCCTCGA AAAAGTGCTG
GAGGAAGATC CAGAGGATAT TTCGGTCAAC AATGATCTGG GCTACCTCTA TGCCGACCAG
GGAAAAAACC TGGAAAAAGC CGAGAAAATG ATCCGCAAGG CGGTGGCAGC AGAACCTGAA
AATGCTGCGT ATCTCGACAG CCTCGGCTGG GTGCTGTTTA AGCTCGGAAA GTATGAAGAG
GCGCTTTCTC CACTGGAAAA AGCCGCTGAG ATGCGGACGG GTGGAGATGG GACAATCTAT
GAGCATCTCG GGGACGTTTA CAACAAACTG GGTCGAGCCG CCGACGCTCA GAAGGCCTGG
GCAAAAGCGA TGGAAAAATC CAGAGCCGAA CGTCTCCCTG ATGAGAAATT GCTCAAGCGA
CTGGAAGAAA AGTTAGGGAC GGCTGCCAAA CCCAAAGAAG GGGGCAAGCC ACAGGCCATA
GAGCCCACGT CCTGA
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| Protein sequence | MEHVRKWSLG LTAFRLRRDG GFHLFKFGLM IPCCVALSVV SGNGLADTFL KRAAAQEVAT
PPPVSEEATK KTAASEETQP AGSPKVTAGP VIQLQTLDEP AVPLTPKTPR TAAEEKQAEA
LAWFMSGSLF ESRLEWKRAY TAYQRAAELN PGSAETYRKL MQIALIQEQP AQAMSWAMKV
VDLDPADFEV LHTLAAGMAA QQKGAEAIKF LEQAANSPTL DPLSNWAIRL QRDLAILYLA
TGDIPKAADK YELLLKVFKK PDEFKLDPRF RNELMNDPRT GAERVAQVLL DAERVAPARE
ALELAVKTGK ASRGNVNFYQ AKLLLLEGKP AEALVELQKY IDAQRQSKGR EAYELLSQIL
SRSGLEGELI DRLTAIAEKD QRNSTLQFFL AEKLTDRGDY EKAEKIYEAS LKGSRDLKGY
LGLSRLYRKQ KVADKLLDTL GRGLSQAPPD GVDEIEAEFE SVAKDRELVG LVIDAGRRQA
SAEPRELTFE EAYLVAKLAS QGEQIDAAIE FFRKAKEIAP DRGGIVLSDL AEMLLKADRY
ADAAQVLEEA LEEPAMADRK PNLLFQLSQA REMNGNTEGA LEAIDQAIRL IPQAAVLQFQ
KGWIYYHSRN FEKAIAQFET VLRDFPGETR IVRQCQFSLS NIYVMQGDIP RGEAILEKVL
EEDPEDISVN NDLGYLYADQ GKNLEKAEKM IRKAVAAEPE NAAYLDSLGW VLFKLGKYEE
ALSPLEKAAE MRTGGDGTIY EHLGDVYNKL GRAADAQKAW AKAMEKSRAE RLPDEKLLKR
LEEKLGTAAK PKEGGKPQAI EPTS
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