Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2548 |
Symbol | |
ID | 9139259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3310052 |
End bp | 3311167 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Dihydrodipicolinate synthase |
Protein accession | YP_003630572 |
Protein GI | 296122794 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTGA GTACGAACCC CAAGTCCTCC AGCCAGAAGC TCCGTGGAAT TCTGACCCCA AACATTGTGC CGCTGGATAA TCAGGGGCGG ATCCATGAAT CAGAACTTCG CCGCTATGTG GATTGGCTGA TTGCCCATGG TGTTCATGGA CTCTACCCCA ACGGTTCGAC GGGAGAATTC CTCAGGTTTA CCGCCGATGA ACGCCGCGAA ATTATGCGGA TCATTCTGGA TCAGGTGCGC GGCCGTGTCC CCGTATTAGC CGGTGCAGCT GAAGCCAATA CGCGGGAAAC GATCCGTGCC TGTGAAACGT ACTACGACAT GGGTGCAACG GCTGTCGCCA TTGTTTCCCC CTTCTATTAC AAGCTGAGTC CGCGGGCGGT TTACGCGTAT TTCAAAGAGA TTGCCGACAA CACGCCCATC GATGTGACTC TCTATAACAT TCCTTTGTTT GCCAGCCCGA TTGACGTACC GACCGTCGAA CGCCTGGCTT TCGACTGTCC CAAAATTGTG GGCATCAAGG ATTCTTCCGG CGACTTGCCA CACATGGCCC GCATGATTCA AGCGATCCGG CCACATCGCC CCGATTTCAG TTTTCTCACG GGCTGGGATG CGTCTCTTGT TCCCATGCTG CTCATGGGTT GCGATGGTGG TACCAATGCC AGCTCAGGCG TTGTTCCAGA GATCACCCGC AAGCTGTTCG ATCTCTGTGA ACTGGGTCAG TATCACCAGG CCCGTGAAAT CCAATTCGAG TTGATCACTT TGTTCGACGC CATGATCGGT GCCGCCGAAT TCCCCGATGG CTTTCGACTC GGCGTACGCT TGAGAGGCTT CGAAACTGGC GCTGGTCGTC AACCTCTCAC TGCCGAGCAA CAGACCGAAC TGTCGAAACT GGCCGACACT CTGCAGTGCC TGCTCGCCCG GCACGGCCTG ACCAATGCTC CTCACTCCGG TTGCGACCCC AAAATGGCGC CGGCAGCACT CACCTTCGGC AGTACTCCGC TCACATCATC ACCATCCGGC AAGGCAGACA CTCCACCGGT TCCAACACCA CTGACGGAAG ATCAACTCAC ACAGATCGTC CAAACGGTTC TGACTGAACT CGGACGACCA CGCTAG
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Protein sequence | MQLSTNPKSS SQKLRGILTP NIVPLDNQGR IHESELRRYV DWLIAHGVHG LYPNGSTGEF LRFTADERRE IMRIILDQVR GRVPVLAGAA EANTRETIRA CETYYDMGAT AVAIVSPFYY KLSPRAVYAY FKEIADNTPI DVTLYNIPLF ASPIDVPTVE RLAFDCPKIV GIKDSSGDLP HMARMIQAIR PHRPDFSFLT GWDASLVPML LMGCDGGTNA SSGVVPEITR KLFDLCELGQ YHQAREIQFE LITLFDAMIG AAEFPDGFRL GVRLRGFETG AGRQPLTAEQ QTELSKLADT LQCLLARHGL TNAPHSGCDP KMAPAALTFG STPLTSSPSG KADTPPVPTP LTEDQLTQIV QTVLTELGRP R
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