Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2500 |
Symbol | |
ID | 9139211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3260108 |
End bp | 3261235 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | flagellar motor switch protein FliM |
Protein accession | YP_003630525 |
Protein GI | 296122747 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.564591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGATG TACTCAGCCA GTCGGAAGTA GAGACACTGC TGGCAGCACT CGATCCGGCT CCACGCAGTA ATGCTGGTTC TGCCATGAGC GGCCCGGCAC CCAGTTCGAC ACCAGTCCGT CGGCGAGAAA ATGGGCCGCA GATCAGTGTT TACGATTTCA AGCGTCCCGA GCGCGTCAGT AAAGAACAGA TGCGTGCCTT TCAGGCATTG CACGAAGGTT TCAGCCGGGA GTTTGGCGCT GCACTTTCGG GGATGCTGCG AGCGATTGTC GAAGTCAAAC TGATCAGCGT GGATCAATTA ACGTACAGCG AGTTTGTCTT CAGCCTGGAG AACCCCACCT GCTTCAACCT CCTCGAATCG AAAGGTCTTG AAGGACATCT GATCCTGGAT TTGAGTCCTT CGATCATTTT TCCGATTGTG GATCGTCTCT TAGGTGGTGG GAAAGAAAGC ATCCCGAGCA TTCCCAGTCG GCCGCTCACT GAGATTGAAC TGCAACTGGT GTCGCGGATC ACATTACTGG TGATCAATGG GCTTGAAAAC GCATGGCATA ACGTGTGCAG CCTGGGCCTG AAGGTAACTC AGATCGAGAG TAACCCTCAA CTGGTGCAGA TTGTGCCACC GAACGAAGTG ATTGTGCTGG TCAGTTTTGA GATCACGATG GGTGAAGTCC GCGGCATCAT GAACCTGTGT ATTCCATTCA ATACGATCGA GCCACTTTCC GGAAAACTCT CGTCGGACAC ATGGTCGGCT TATCAGAAGA AGGGGCTTGA TCCCAAACAG CGAGTGATTC TGGAAGACGG GCTTTCCAAG GCCGCCGTCA AAATGATTGT GAATCTGGCA CACACTCGAC TCACAGCGCG AGACCTGGCT CATCTGGCTG TGGGAGATGT GATCATGACT GAACACCCCA AAGAAGATGG GTTGGAAGTG GTGGTCGAGG GCTGCCCGAT GTTTATGGCG AAACCCGGTG CCGTCAAAGG GAAAAAGGCC ATTCGCGTCA CGGGAATGGT GGCCCACAGC CGGGATATTC TGCGCGAAAA GCTGCAAGCG GCCGCAGAAT CATCGACCAC TAAAACGGCG CCAGCTGTCA CTGAACCGAA AACCAATCCA CCCAAGCCCC GGACCTAA
|
Protein sequence | MADVLSQSEV ETLLAALDPA PRSNAGSAMS GPAPSSTPVR RRENGPQISV YDFKRPERVS KEQMRAFQAL HEGFSREFGA ALSGMLRAIV EVKLISVDQL TYSEFVFSLE NPTCFNLLES KGLEGHLILD LSPSIIFPIV DRLLGGGKES IPSIPSRPLT EIELQLVSRI TLLVINGLEN AWHNVCSLGL KVTQIESNPQ LVQIVPPNEV IVLVSFEITM GEVRGIMNLC IPFNTIEPLS GKLSSDTWSA YQKKGLDPKQ RVILEDGLSK AAVKMIVNLA HTRLTARDLA HLAVGDVIMT EHPKEDGLEV VVEGCPMFMA KPGAVKGKKA IRVTGMVAHS RDILREKLQA AAESSTTKTA PAVTEPKTNP PKPRT
|
| |