Gene Plim_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2500 
Symbol 
ID9139211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3260108 
End bp3261235 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content54% 
IMG OID 
Productflagellar motor switch protein FliM 
Protein accessionYP_003630525 
Protein GI296122747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.564591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATG TACTCAGCCA GTCGGAAGTA GAGACACTGC TGGCAGCACT CGATCCGGCT 
CCACGCAGTA ATGCTGGTTC TGCCATGAGC GGCCCGGCAC CCAGTTCGAC ACCAGTCCGT
CGGCGAGAAA ATGGGCCGCA GATCAGTGTT TACGATTTCA AGCGTCCCGA GCGCGTCAGT
AAAGAACAGA TGCGTGCCTT TCAGGCATTG CACGAAGGTT TCAGCCGGGA GTTTGGCGCT
GCACTTTCGG GGATGCTGCG AGCGATTGTC GAAGTCAAAC TGATCAGCGT GGATCAATTA
ACGTACAGCG AGTTTGTCTT CAGCCTGGAG AACCCCACCT GCTTCAACCT CCTCGAATCG
AAAGGTCTTG AAGGACATCT GATCCTGGAT TTGAGTCCTT CGATCATTTT TCCGATTGTG
GATCGTCTCT TAGGTGGTGG GAAAGAAAGC ATCCCGAGCA TTCCCAGTCG GCCGCTCACT
GAGATTGAAC TGCAACTGGT GTCGCGGATC ACATTACTGG TGATCAATGG GCTTGAAAAC
GCATGGCATA ACGTGTGCAG CCTGGGCCTG AAGGTAACTC AGATCGAGAG TAACCCTCAA
CTGGTGCAGA TTGTGCCACC GAACGAAGTG ATTGTGCTGG TCAGTTTTGA GATCACGATG
GGTGAAGTCC GCGGCATCAT GAACCTGTGT ATTCCATTCA ATACGATCGA GCCACTTTCC
GGAAAACTCT CGTCGGACAC ATGGTCGGCT TATCAGAAGA AGGGGCTTGA TCCCAAACAG
CGAGTGATTC TGGAAGACGG GCTTTCCAAG GCCGCCGTCA AAATGATTGT GAATCTGGCA
CACACTCGAC TCACAGCGCG AGACCTGGCT CATCTGGCTG TGGGAGATGT GATCATGACT
GAACACCCCA AAGAAGATGG GTTGGAAGTG GTGGTCGAGG GCTGCCCGAT GTTTATGGCG
AAACCCGGTG CCGTCAAAGG GAAAAAGGCC ATTCGCGTCA CGGGAATGGT GGCCCACAGC
CGGGATATTC TGCGCGAAAA GCTGCAAGCG GCCGCAGAAT CATCGACCAC TAAAACGGCG
CCAGCTGTCA CTGAACCGAA AACCAATCCA CCCAAGCCCC GGACCTAA
 
Protein sequence
MADVLSQSEV ETLLAALDPA PRSNAGSAMS GPAPSSTPVR RRENGPQISV YDFKRPERVS 
KEQMRAFQAL HEGFSREFGA ALSGMLRAIV EVKLISVDQL TYSEFVFSLE NPTCFNLLES
KGLEGHLILD LSPSIIFPIV DRLLGGGKES IPSIPSRPLT EIELQLVSRI TLLVINGLEN
AWHNVCSLGL KVTQIESNPQ LVQIVPPNEV IVLVSFEITM GEVRGIMNLC IPFNTIEPLS
GKLSSDTWSA YQKKGLDPKQ RVILEDGLSK AAVKMIVNLA HTRLTARDLA HLAVGDVIMT
EHPKEDGLEV VVEGCPMFMA KPGAVKGKKA IRVTGMVAHS RDILREKLQA AAESSTTKTA
PAVTEPKTNP PKPRT