| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2403 |
|---|
| Symbol | |
|---|
| ID | 9139114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3132986 |
|---|
| End bp | 3134587 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_003630428 |
|---|
| Protein GI | 296122650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.784107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATAG GTCTGAGAGG ATTAGAGGGC GTCGAGAGTG GTGGAGGCCA TCGATCTCCA
CCCCATGTTC GACCGGTGGC TGTGATTGAT ATCGGTGCCA CGTCGATTCG CATGGCGATT
GCTGAACTTC ACGAATCGGG AGAGGTGCAT CTGCTCAGCA CCCTATCGCA AGCTGTGCAT
CTGGGGCGGG ATGTTTTTTC GAAGGGTGTG ATCGACAAAG CGACCATTGA AGAATGTGTG
CGTGTGCTGC GGAGTTATCG GCGTGTCCTG GCGGAGTATG AACTATCCCG GCCCGACCAG
ATTCGTGTGG TAGCGACAAG TGCCGTTCGC GAATCGATGA ACAAACTGGC CTTTCAGGAT
CGAATTTATA CAGCCACCGG ATTGCAGGTC GAAGTGATCG ACGAGGCGGA AGTCAGTCGG
ATCACTTACC TGGGTGTTCA GCCACTGCTG AAATCCGACA AGCAGTTTGC CGAATGGGGA
ACGCTTGTTG TCGAAGTGGG TGGGGGAAGT ACGGAAATTC TGGTGCTCCA GAATTGTGAT
GTGCAGTTTT CACAGACCTA TCGGCTGGGC TCATTGAGAC TGCGGGAAAC GATCGAAGCG
TATCAGTCTT CCCGTGTCAC GATTCGGCAC ATTCTGGAAA CGCAGATGCG GCGTGTGATC
GAGCAGGTCT CGCAGCATGT CAATCGTTCA GAGATCCGCA ATATGGTTGC ACTGGGTGGC
GACATGCGGT TTGCCGCCCA TCAACTGGGT GGGGAAGTGG GCCACGATGG CATGCTCAAG
CTGAAAGTGA ATGAACTCGA AAAGTTGACG AATACGATTC TCGACCTGAA TGAAGACAAG
ATCGTCCATA AGTATCACAT TTCATTTCCG GATGCGGGGA CATTAGGGCC GGCACTGCTG
GCTTACGTCC AGATGGCGAA GTCATTCCAA CTCGATGAGA TTCACGTGGC GAACGTCAAT
CTGCGCGATG GCATGCTGAC GGATATGGCC TCGCATGGGG CTCTCAATGA AGATTTTCGC
AATCAGGTGG TGCGTTCGGC GATTGAGCTC GGGAGGAAGT TTAACTTTGC TGAAGCTCAT
GCTCGGCATG TGGCTAAACT CTGCAAAATC CTCTTTCAAG GTTTACGAGA AGAGCATCAT
CTGGAACCCC GGTTCGAACT GCTGCTGACT GTCGCTGCAC TCCTGCACGA AATCGGCCTG
TATATTGGCC CGAGTGGCTA TCATAAGCAT TCGATGTATC TCATTCTGAA CAGCGAGCTT
TTCGGTCTCA GCCGGACGGA TGTGATGCTG ATTGGCCTGA CGGCCCGGTA CCATCGCAAG
ACATCCCCTA AGCCGACGCA TACCGGCTTT ACGCAACTGG ATCGCGACCA GCGAATTGCG
GTCGTCAAAA TGGCGGCATT ATTACGGCTG GCCGATGCCC TCGATGCTTC GCACAGCCAG
CGACTGCACG AATTGTGGTT TGCCCGGGAA GGTTCGAGGC TGGTGATCAG TCTGCCTCAA
GTCGAAGATC TGGCTCTTGA ACAACTGGCA CTCAAACAGA CAGGGGCACT TTTTGAGGAA
ACCTACGGAA TGTCGGTTCT GCTTCGAAAA CTGAGGCAGT AA
|
|---|
| Protein sequence | MLIGLRGLEG VESGGGHRSP PHVRPVAVID IGATSIRMAI AELHESGEVH LLSTLSQAVH
LGRDVFSKGV IDKATIEECV RVLRSYRRVL AEYELSRPDQ IRVVATSAVR ESMNKLAFQD
RIYTATGLQV EVIDEAEVSR ITYLGVQPLL KSDKQFAEWG TLVVEVGGGS TEILVLQNCD
VQFSQTYRLG SLRLRETIEA YQSSRVTIRH ILETQMRRVI EQVSQHVNRS EIRNMVALGG
DMRFAAHQLG GEVGHDGMLK LKVNELEKLT NTILDLNEDK IVHKYHISFP DAGTLGPALL
AYVQMAKSFQ LDEIHVANVN LRDGMLTDMA SHGALNEDFR NQVVRSAIEL GRKFNFAEAH
ARHVAKLCKI LFQGLREEHH LEPRFELLLT VAALLHEIGL YIGPSGYHKH SMYLILNSEL
FGLSRTDVML IGLTARYHRK TSPKPTHTGF TQLDRDQRIA VVKMAALLRL ADALDASHSQ
RLHELWFARE GSRLVISLPQ VEDLALEQLA LKQTGALFEE TYGMSVLLRK LRQ
|
|---|
| |