Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2294 |
Symbol | |
ID | 9138999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2961258 |
End bp | 2964566 |
Gene Length | 3309 bp |
Protein Length | 1102 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_003630319 |
Protein GI | 296122541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGTTTT GCCGCTACTT TATTGACCGC CCGATTTTTG CAGCCGTCCT GTCAATTCTT GTGACATTGG CGGGGGCGAT CGCATTGTTC CGCCTGCCCA TTGCTCAATT CCCGGCAGTC GCACCACCCA CTGTCCAGGT CGATTGCAAT TATCCCGGTG CCAGTTCGCT GGTTGTGGCA CAGACCATTG CTGCTCCTAT TGAGCAGCAG GTGAATGGTG TCGAAGAAAT GCTCTACATG TCGTCGCAGA GCACGAGCGA CGGCTCCTAT ACGCTCACAG TGACTTTCAA GCCCGGTGTT GATCTGAACC TGGCACAGGT GCTGGTGCAA AACCGGGTTT CATTGGCGAG GCCACAGCTT CCCGATGTCG TACGCGCCAC AGGTGTCACC ACGAAGAAAC GCGCCCCGGA TATTCTCCTG ACGATCAGCA TCAACTCGCC AGATAACCGC TACGATCAGC TCTACATCAG CAATTATGCG CTGCTCCACT TGCGAGACGA AATCGCGCGA ATTCCAGGGA TCAGCGAAGT TCTCCTGTTT GGCCAGCGCG ATTACAGCAT GCGTGTCTGG ATCGACCCCG AACAGCTTTC CACCCGCAAC CTCACTGCCA ATGACGTCGT TAACGCCATC CGTGAACAGA ATTTCCAGGT CGCAGCCGGT TCTATCGGGC AACCTCCTCA TTCCGGCTCA TCGACTCGGC AGATTCCCCT GGCAGTGGTG GGACGATTAA CCAATGAGAC TGCCTTCGAA GACATTGTCG TCCGAGCCGA CCATGATCAA CTGATTCGCA TTCGCGATAT TGGACGCGTC GAATTAGGTG CCCGCAGTCA GGACATCAAC AACCGTTTTG ATGGGAAACC GACAGTTGGC CTCGCGATTT TTCAACTTTC AGACGCAAAT GCCCTGACAA CAGCCGATTT GATTAAGGCG AAAATCGAAG AGCTTTCGAA GGATTTTCCC GAAGGTCTGG CTTACGAAAT CGGCTATGAC ACGACGCCAT TCATCCGCGA ATCAATCGAT GAAGTTTTCA AAGCTTTACG AGATGCCACC ATCCTCGTCG CCTTAGTGGT CCTGGTCTTC CTGCAGGGCT GGCGCCCAGC CATTATCCCG CTCATCGCAG TCCCCGTGGC GATTGTCGGA ACATTTGCGG CTATGGCAGT GGTGGGCTTC AGTATCAATA ACCTCACCTT GTTCGGACTT GTGCTGGCCA TTGGCATTGT TGTGGACGAT GCGATCGTCG TCGTCGAAGC GGTACAGCAT CATATCTCGC AAGGACTGAA TCCTCGGGAA GCGGCGGTCC GTGCCATGGA CGAAGTCGCT GGGCCTGTGG TGGCTGTGGG ACTGGTTCTC AGCTCAGTGT TTATCCCATG TGCGTTTATT ACTGGAATTG TGGGGGAGTT CTTCCGGCAA TTTGCTCTGA CAATTGCGAT CTCAACCATC CTTTCGATGC TCAATTCGCT GACACTCAGC CCGGCCCTGG CGGCCATTCT GCTGCAAGGC AAAGACGACC GACCAGACAT TCTCACCCGC ATCATTAACT TCTTGTTCGG CTGGTTCTTT GCAGCTTTCG ACTGGTCATT TCGAACATCC ACTTCGCTCT ACACTCGCTT CGTCGGGCAA CTGCTGCGAA TTCCAGTCCT CGTACTCATC GTTTATGGCG GATTGCTCTT CCTCACAGGC TGGGGATTCA ACCAGCTACC CAAAGGATTT ATTCCCTCGC AGGACATGGG CTACCTGATT GCCAGCATTC AGCTTCCCGA TTCGGCAGCA GCCGGTCGGA CGCGAGATAC CGTGGCACGA ATTGAAGAAA TCACACTCAA GACACCAGGC GTCAAGAACG TCAATTCGAT TGCCGGGAAC TCCTTTATTT TGAGTTCTTA TGGTTCAAAT TTTGGCTCGA TGTTCATCAT TCTCGATTCG TTTCATCACC GGAAAGGTCA CGCCGGACAA TCTGCGGAAG AGATTGCCGC ATCACTGAGA AAAAGTTTTG CCAAAGATGT CCCCGAAGCC CTCGTGAGTG TCTTTCCTCC ACCAGCCGTC CGTGGATTGG GGAGAGCTGG CGGTTTTCGA CTGATGGTTG AAGATCGCGA AGATCTGGGG CTTAAAGAGC TGCAGAAAGG GACCGACGAA CTGATTGCGA AGATGAATGC CACCGGGAAA GTTCAAGGAG CATTTACCGT CTTCAAAACG AACTCGCCAC AGATCTTTGC CGATATCGAC CGTCAGGCGT GTCTTCAACT GAATGTCCCC TTACAGGAAG CCTTTGCCGC CCTACAGGCC ACGATGGGTT CGCGATACGT CAACGACTTC AATCGATTTG GGCGTACCTG GCAGGTGGTG GTTCAGGCCG ATACGGATTT CCGAAATGAC CTGGCAGATT TGAAACGTAT CAAAGTTCGT AATAGTCACG GAGAGATGGT TCCACTGGCG TCTGTCTGCA CGCTGAAGGA AGTCAGCAAT CCTCTCGTGA TCTCGCGCTA TAACATGTAT CCGGCTGCGA CTGTCAACGG GAACGTCGCC CCGGGATTCA GCACAGGCGA GACGCTCGAC ATGGTCGAAC AACTGGCCGC GAGTGAACTT CCAATCGGCC TCGCGACGGA GTGGTCGGAA CTTTCTTACA TGGAGCGGCA AGCAGGTAAC ACCGGGATGT TCGTCTTCTA CATGGCAATT GCCTTCGTGT TTCTGGTACT GGCAGCTCTT TACGAAAGCT GGGCCTTGCC GCTGGCAGTC ATTCTGGTCG TCCCGATGTG CATTTTGAGT TCGATCACAG GTGTGGCGTA TGCCGCCATG GATATCAATG TTTTCACTCA GATTGGATTT GTCGTGCTGA TTGGTCTGGC CTGCAAAAAC GCGATTCTGA TTGTCGAATT TGCACGTTCT CGACGTCATG AAGGAGCCAC GATTCGCGAG GCCACGCTCG AAGCCTGCCA CTTGAGGTTA CGGCCCATCC TGATGACATC GTGCGCCTTT ATTCTGGGAG TGATCCCATT AATTCTGGCC ACTGGTGCAG GTGCCGAGAT GCGGAGAACC TTGGGCGTGG CGGTTTTCAG TGGCATGCTC GGAGTGACCT GCTTTGGCAT TCTGTTGACC CCAGTTTTCT TCTACGTAAT TGAACATCTG AGTGAAGCGG AGTTCTTCCG ATCATCAAAG ATCCGCGAGC CAGCCCAGTG GGTACTCGAT CTGATTCGTC TCAAACCACT CTGGCGAGGG GCCCAATGGT CAGGCCGGCA CCTGATTTCG ATATCAGACA AGATTGAAGA AAGATTTCGT CCTCATGACC CTGGAAGTTC ATCATCAGGT CATTCATAG
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Protein sequence | MQFCRYFIDR PIFAAVLSIL VTLAGAIALF RLPIAQFPAV APPTVQVDCN YPGASSLVVA QTIAAPIEQQ VNGVEEMLYM SSQSTSDGSY TLTVTFKPGV DLNLAQVLVQ NRVSLARPQL PDVVRATGVT TKKRAPDILL TISINSPDNR YDQLYISNYA LLHLRDEIAR IPGISEVLLF GQRDYSMRVW IDPEQLSTRN LTANDVVNAI REQNFQVAAG SIGQPPHSGS STRQIPLAVV GRLTNETAFE DIVVRADHDQ LIRIRDIGRV ELGARSQDIN NRFDGKPTVG LAIFQLSDAN ALTTADLIKA KIEELSKDFP EGLAYEIGYD TTPFIRESID EVFKALRDAT ILVALVVLVF LQGWRPAIIP LIAVPVAIVG TFAAMAVVGF SINNLTLFGL VLAIGIVVDD AIVVVEAVQH HISQGLNPRE AAVRAMDEVA GPVVAVGLVL SSVFIPCAFI TGIVGEFFRQ FALTIAISTI LSMLNSLTLS PALAAILLQG KDDRPDILTR IINFLFGWFF AAFDWSFRTS TSLYTRFVGQ LLRIPVLVLI VYGGLLFLTG WGFNQLPKGF IPSQDMGYLI ASIQLPDSAA AGRTRDTVAR IEEITLKTPG VKNVNSIAGN SFILSSYGSN FGSMFIILDS FHHRKGHAGQ SAEEIAASLR KSFAKDVPEA LVSVFPPPAV RGLGRAGGFR LMVEDREDLG LKELQKGTDE LIAKMNATGK VQGAFTVFKT NSPQIFADID RQACLQLNVP LQEAFAALQA TMGSRYVNDF NRFGRTWQVV VQADTDFRND LADLKRIKVR NSHGEMVPLA SVCTLKEVSN PLVISRYNMY PAATVNGNVA PGFSTGETLD MVEQLAASEL PIGLATEWSE LSYMERQAGN TGMFVFYMAI AFVFLVLAAL YESWALPLAV ILVVPMCILS SITGVAYAAM DINVFTQIGF VVLIGLACKN AILIVEFARS RRHEGATIRE ATLEACHLRL RPILMTSCAF ILGVIPLILA TGAGAEMRRT LGVAVFSGML GVTCFGILLT PVFFYVIEHL SEAEFFRSSK IREPAQWVLD LIRLKPLWRG AQWSGRHLIS ISDKIEERFR PHDPGSSSSG HS
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