Gene Plim_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2196 
Symbol 
ID9138900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2829056 
End bp2830033 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003630221 
Protein GI296122443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.260267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCA CCATTGCCAG CGGGATTTTC ATGTCTGTCG TTGTGGGAAT TTTTGGAGGT 
TGCCTCGCCA GCACCATCTG GAGTCTGGCC GCTTTTCTTG ACCGCGACAT GGCCAGCCCG
ATTCCTAAAC GCCAGCTGAG CGATCAGCAG GCTGCATGGC CCGCACTGGC AACATGGTTG
GCCTGCAGTT GGATCCTTTT GTCACTGCTC TTACCTGCCA TTCTGCATGT GATCAGTCCC
GCACCAAAAC CTGCTGCCGA ATTCACCATG AACCAGGTTC TCTTTCTGGT CGCACAGAAC
ACGATCATCA TGCTGTTTCT GCTATTGGCC ATTGATCCCA GGCGATTTCG CGCAGTCGGT
ATCATCAGCC CGGAACCAGT TCAAGACTTG ATTTCAGCGG TGTGGGCCAC TCCGCTCATG
CTCACTGGTG CCGCGATTCT GCGAATTTCT TTAAGCCCGT GGATCAAGCC TGAAGACAGC
CATCCGATTC TCAAGATGCT CTCGTTCGAT TCTCCATGGA TCAACATCGC GCTGCTGTTG
TTGACAGCTG CGATTGTGGC TCCTCTGTTT GAAGAACTAT TGTTCCGAGT CATCCTTCAA
GGCTGGCTCA CTCGTCTGCT GGGAAGGAAC TGGTCCATTC CCATCGTTGC GATGGCGTTT
GCGGCTGTGC ATGGCTGGCC AGATGCGGTG CCACTGCTGC TGGTTGGTTT CATGCTGGGA
ATCCTCTTTG ACCGCAGAAG AAGCTGGCTC TCGGTCGTGG CCCTGCACTC ATTTTTTAAT
GCCACCATGT TGATCATGCA GGTTCTGGCG GTGAACGCGA CTCAACCGGC TGCTCCCGAA
AAATCTCCAG TCCCTGAACA ACAAAATCCA CCGATCACAG CACCCGAAGC CATCGAAGTT
TCCTTTTCGC AAAAAGCTGG TATCGCTCTC GAAACGCTAT TCGAAGATCA ACTTCCAATG
AAAGTCAGGA CTTCTTGA
 
Protein sequence
MNSTIASGIF MSVVVGIFGG CLASTIWSLA AFLDRDMASP IPKRQLSDQQ AAWPALATWL 
ACSWILLSLL LPAILHVISP APKPAAEFTM NQVLFLVAQN TIIMLFLLLA IDPRRFRAVG
IISPEPVQDL ISAVWATPLM LTGAAILRIS LSPWIKPEDS HPILKMLSFD SPWINIALLL
LTAAIVAPLF EELLFRVILQ GWLTRLLGRN WSIPIVAMAF AAVHGWPDAV PLLLVGFMLG
ILFDRRRSWL SVVALHSFFN ATMLIMQVLA VNATQPAAPE KSPVPEQQNP PITAPEAIEV
SFSQKAGIAL ETLFEDQLPM KVRTS