Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2196 |
Symbol | |
ID | 9138900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2829056 |
End bp | 2830033 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Abortive infection protein |
Protein accession | YP_003630221 |
Protein GI | 296122443 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.260267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGCA CCATTGCCAG CGGGATTTTC ATGTCTGTCG TTGTGGGAAT TTTTGGAGGT TGCCTCGCCA GCACCATCTG GAGTCTGGCC GCTTTTCTTG ACCGCGACAT GGCCAGCCCG ATTCCTAAAC GCCAGCTGAG CGATCAGCAG GCTGCATGGC CCGCACTGGC AACATGGTTG GCCTGCAGTT GGATCCTTTT GTCACTGCTC TTACCTGCCA TTCTGCATGT GATCAGTCCC GCACCAAAAC CTGCTGCCGA ATTCACCATG AACCAGGTTC TCTTTCTGGT CGCACAGAAC ACGATCATCA TGCTGTTTCT GCTATTGGCC ATTGATCCCA GGCGATTTCG CGCAGTCGGT ATCATCAGCC CGGAACCAGT TCAAGACTTG ATTTCAGCGG TGTGGGCCAC TCCGCTCATG CTCACTGGTG CCGCGATTCT GCGAATTTCT TTAAGCCCGT GGATCAAGCC TGAAGACAGC CATCCGATTC TCAAGATGCT CTCGTTCGAT TCTCCATGGA TCAACATCGC GCTGCTGTTG TTGACAGCTG CGATTGTGGC TCCTCTGTTT GAAGAACTAT TGTTCCGAGT CATCCTTCAA GGCTGGCTCA CTCGTCTGCT GGGAAGGAAC TGGTCCATTC CCATCGTTGC GATGGCGTTT GCGGCTGTGC ATGGCTGGCC AGATGCGGTG CCACTGCTGC TGGTTGGTTT CATGCTGGGA ATCCTCTTTG ACCGCAGAAG AAGCTGGCTC TCGGTCGTGG CCCTGCACTC ATTTTTTAAT GCCACCATGT TGATCATGCA GGTTCTGGCG GTGAACGCGA CTCAACCGGC TGCTCCCGAA AAATCTCCAG TCCCTGAACA ACAAAATCCA CCGATCACAG CACCCGAAGC CATCGAAGTT TCCTTTTCGC AAAAAGCTGG TATCGCTCTC GAAACGCTAT TCGAAGATCA ACTTCCAATG AAAGTCAGGA CTTCTTGA
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Protein sequence | MNSTIASGIF MSVVVGIFGG CLASTIWSLA AFLDRDMASP IPKRQLSDQQ AAWPALATWL ACSWILLSLL LPAILHVISP APKPAAEFTM NQVLFLVAQN TIIMLFLLLA IDPRRFRAVG IISPEPVQDL ISAVWATPLM LTGAAILRIS LSPWIKPEDS HPILKMLSFD SPWINIALLL LTAAIVAPLF EELLFRVILQ GWLTRLLGRN WSIPIVAMAF AAVHGWPDAV PLLLVGFMLG ILFDRRRSWL SVVALHSFFN ATMLIMQVLA VNATQPAAPE KSPVPEQQNP PITAPEAIEV SFSQKAGIAL ETLFEDQLPM KVRTS
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