| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2182 |
|---|
| Symbol | |
|---|
| ID | 9138886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2811657 |
|---|
| End bp | 2814839 |
|---|
| Gene Length | 3183 bp |
|---|
| Protein Length | 1060 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Serine/threonine protein kinase-related protein |
|---|
| Protein accession | YP_003630207 |
|---|
| Protein GI | 296122429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCA AACTGTCCAG TGAATCATTC CTTGCAACTG TTCGCCGCAG CGGCCTCATT
GAGGACGACC GACTTAATAT TTTGTATGCG GAATACGCGG AACGATTGAA CGGCGAGGCC
GATTCCACAG ACCTGGCTCA ATTTCTTGTC AACCGGAATG CGGTGACCGC CTGGCAGGGT
GAAAAGCTGC TCCAGGGAAA ACATAAGGGG TTTTTCCTGG GGAAGTATCG CCTGCTGTCA
CTCCTCGGCC GGGGAGGCAT GAGTTCGGTC TATCTCGCTG AACATATTGT GATGCGCCGC
CGCTGCGCGA TTAAAGTGCT CCCACAAAAA CGAGTCTCAG ATACTTCGTA CCTGGGAAGA
TTTCACCGAG AAGCCCAGGC TGTTGCTTCA CTGGATCACC CCAATATCGT CCGCGCTTAC
GATGTCGATC ATCAGGCGGA TCGCGATACA GATATCCACT TCCTTGTCAT GGAATTTGTC
GACGGGCAGA GCCTTCAGGA ACTGGTGTTA AAATCTGGTC AGGTGCCATT TGCAGATGCA
GCAGATTACA TTCGTCAGGC GGCTCTGGGA TTATCCCACG CCCATGGTGC CGGTCTTGTC
CATCGGGACA TCAAGCCCGG AAATCTGCTT GTGGATCATA CGGGGGTCGT GAAGGTTCTC
GATCTGGGAC TTGCCAGGTT TTTCAGTGAT ACCGGCGACG ATGCCCTCAC CATTCAGCAC
GATGAAAAAG TTCTCGGGAC AGCCGATTAT CTGGCACCGG AACAAGCCCT CGACAGCCAC
TCCGTCGACG CTCGTGCCGA TATCTACAGC CTGGGCTGCA CACTTTATTT TCTACTCACG
GGCTCCCCTC CATTTACCGA AGGGACTCTG GCGCAGCGAT TGATGGCGCA TCAGACCAAA
CAGCCGCCAT CCATTGAGAG CAAGCGGCCG GATGTTCCTG TCGAACTCGC TGCCATCGTC
CGCAAGATGA TGGCCAAATC CCCAGGCGAC CGGCCTGCTT CTGCAATGGC GGTGGCAGAG
ACCCTGGAAA ACTGGTTGAA GCAGTATCGT TCGGGTGAAG TCTCTTCTGG CGGCGTCTCT
GTAGAAAGTG ATGTTTTACA GCAGGAGGAT GCTCATCCCG CGGCTGTGGC AGGTTTGGAA
TTCCCTCCTC GGGAACCTCT CCCGACGGAT ATGAGCGTGG CTCCAGCCGG GGATGAACTC
TCAGCGTTCC TCACCTCGTT ATCCGGTGGA GTTTCCACAC CCCTCCCTGA ACCAGTACCG
CAGCGAAAAA CGCCAGAGGT CGCCAAGCCT TCGACGGATT CTGCCAAAGG AAAGAAATCA
TCGAGCAGCA CTGGGCAGCC AGTCCATGAT TTTCAGTTTC TTGAGCCACT GAACCACTTG
CCTGAAGAGG GGCATTCTTC GAAATCCAGC TCGGTTTTTG GGGCCGAGAT TGCATCCGCT
CCAACAAAGG CTCCATCGTC TGTTAAGCTC CCCTCATCGA AGACTTTGCC AGCGAATCAG
AACGCCGCTG AAGCATCAGC TGCAAAATCT TCCACAGATC ACGCGGGTTC GAAGAGTTTC
GAAACTCCAG TTCCCCCAAA ATCAGCCTCC GGGATCCAGA GAGCTGCGGG CAGTTCGAAA
GCCGCGTTAG AGCCTCCTGA AGCCAAACCT GTTGCAACCC CTCCACAGAT TGTGGCTGCC
AGCGAAGCTC CCATTCTCGA AGCGATCCCT CTTCGTGAAG GTTCTGGCAA TTCCATACCT
GAGGCCATTC CTGTACGACG TACTGCGAAA GTGATTCGAC CCGCTGCAAC AACTCCCTCC
CCCACAAAAG TCATTTTGGA AGCAATCCCG ATTTCCAATA CCGATCTGGC GAGCGAACCC
TCACAGATGA TTGCGGATGT CGAGCAACCG ATCAGAGATA CGTCCACTTC GAACCGCAAC
AGCAGTTCAC GCTCACAATC CAGTCGTCAC AAAGGAACCG CGAAAAAACT TCCCGGCTGG
GCAATCCCTG CTGGCATCGC TTTGAGCGTC GTCTTCGTTC TCGGCGCTGG ATATACGATC
TTCAGCACTT ACAGCACTCC CACCAAGACT GTGGATTACA GCCGACCCGA CCCCACGTGG
ATTGATCGAC GTGAAACGAC AGTGGGGCCT CAAGGTGAGT TCAAAAAGAT CTCTGACGCT
CTTGCCAAGG TGCGAGCCAA CTTCAAACCT GGCGGAGAGA AAGACCGATT CCGCATTGAG
GTCGCTGCGG GGATATATCC CGAGCGAATC GTGCTCGATT CACGAGGAAG TGGCCGTAAA
TGGCCCGAAA ACATCACTGT GGCTGGGGCT GAAAATGCAA AAGTCGTGAT TCAGGGAGGA
ACACAAACCG GTGATCCCAT CGTGAAGATT CGCGATGTTC AAGGTTTTCA ACTCGAAAAC
ATCACAATCA ATGCTGAAAA GCATGAAACC GCCATCGAAG TCGGGGATTA CCTTTATGGT
ACACGCCTGA CCAATCTGAG CCTTCTGGAT TTTTCAAATG CTGGAATCAT TGGAAAGGAT
GTTTCCGGGC TTCTGGATAA GGAATTCACC ATCAATGACT GCCTGATTTC AACGAAGTCG
GAGAAGGCCG TCGGTGTCCG GCTGGAAGCC AAAGAAACTC TGGCAGATGT GAGTTTGCTT
AAAAATCGAT TCCATGGCCC GATGGCGGCT GGTGTACTGA TTGAAGCCTC CAGTTTTGCT
TCGAAAATCC AGATTCGCGA GAATCGTTTT TTCGAATGCG ACAACGCAAT CGAGTTTGCA
GGCGAAGCGT CATGGCTGGG AATTGCCGTC AGTAATAACA CGATTGCTGC TGGAAACCAG
GGAGTTGTAT TTACCGAACA GCCCGGCTCA GACAGCGTGA CACTTTCGAT CAGACGAAAT
CTGTTTGCTG GTCTGAAAGG AGCCGAGATT CGTATTCAAT CGAATTTCAG TGCCGATGGT
TGGAAGAAGG CGACTGAGGG GAGAACTCAG GGTAATGTGA CTGACCGTCT GCCCCCCTCA
CCTGCTCCGG GTGTGATTGA TCTGGCAAAC TCGGGTGGCA GCCGTGTCGG CAGCAAAATC
AGCTTTAAAT CGATGGAACC CACTGATCCC AATTTCCTGG TTCCAGCGAC TCCAGCGATC
CCCAAGCCGA CAGATAACGC TTTGGAGCGA GAGCTGAACC ATACCGGCGC TATTGGGCAG
TAA
|
|---|
| Protein sequence | MPAKLSSESF LATVRRSGLI EDDRLNILYA EYAERLNGEA DSTDLAQFLV NRNAVTAWQG
EKLLQGKHKG FFLGKYRLLS LLGRGGMSSV YLAEHIVMRR RCAIKVLPQK RVSDTSYLGR
FHREAQAVAS LDHPNIVRAY DVDHQADRDT DIHFLVMEFV DGQSLQELVL KSGQVPFADA
ADYIRQAALG LSHAHGAGLV HRDIKPGNLL VDHTGVVKVL DLGLARFFSD TGDDALTIQH
DEKVLGTADY LAPEQALDSH SVDARADIYS LGCTLYFLLT GSPPFTEGTL AQRLMAHQTK
QPPSIESKRP DVPVELAAIV RKMMAKSPGD RPASAMAVAE TLENWLKQYR SGEVSSGGVS
VESDVLQQED AHPAAVAGLE FPPREPLPTD MSVAPAGDEL SAFLTSLSGG VSTPLPEPVP
QRKTPEVAKP STDSAKGKKS SSSTGQPVHD FQFLEPLNHL PEEGHSSKSS SVFGAEIASA
PTKAPSSVKL PSSKTLPANQ NAAEASAAKS STDHAGSKSF ETPVPPKSAS GIQRAAGSSK
AALEPPEAKP VATPPQIVAA SEAPILEAIP LREGSGNSIP EAIPVRRTAK VIRPAATTPS
PTKVILEAIP ISNTDLASEP SQMIADVEQP IRDTSTSNRN SSSRSQSSRH KGTAKKLPGW
AIPAGIALSV VFVLGAGYTI FSTYSTPTKT VDYSRPDPTW IDRRETTVGP QGEFKKISDA
LAKVRANFKP GGEKDRFRIE VAAGIYPERI VLDSRGSGRK WPENITVAGA ENAKVVIQGG
TQTGDPIVKI RDVQGFQLEN ITINAEKHET AIEVGDYLYG TRLTNLSLLD FSNAGIIGKD
VSGLLDKEFT INDCLISTKS EKAVGVRLEA KETLADVSLL KNRFHGPMAA GVLIEASSFA
SKIQIRENRF FECDNAIEFA GEASWLGIAV SNNTIAAGNQ GVVFTEQPGS DSVTLSIRRN
LFAGLKGAEI RIQSNFSADG WKKATEGRTQ GNVTDRLPPS PAPGVIDLAN SGGSRVGSKI
SFKSMEPTDP NFLVPATPAI PKPTDNALER ELNHTGAIGQ
|
|---|
| |