Gene Plim_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2166 
Symbol 
ID9138870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2794422 
End bp2796554 
Gene Length2133 bp 
Protein Length710 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranslation elongation factor G 
Protein accessionYP_003630191 
Protein GI296122413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTAT CCCGTTACCG CAACATTGGT GTTTCGGCCC ACATTGACTC CGGCAAAACG 
ACGCTCTCCG AGCGCATTCT GTTTTACTCC GGCCGTATTC ACTCGATTCA CGAAGTGAAA
GGTAAGGACG GCGTCGGGGC TACCATGGAC CACATGGAAC TCGAACGCGA AAAAGGGATC
ACGATCACTT CCGCTGCGAC GCAAGTCACG TGGAAGGATT ACACCGTTAA TCTCATCGAC
ACTCCTGGCC ACGTGGACTT CACCGTGGAA GTGGAACGCA GTCTGCGCGT GCTCGATGGT
GCGATCCTCG TGCTCTGCTC CGTCGGTGGT GTGCAAAGTC AGTCGCTGAC TGTTGACCGC
CAGATGAAGC GGTATAAGGT GCCACGCATT GCGTTCATCA ACAAAATGGA TCGTACTGGG
GCCAATCCCG AGAAGGTCAT TGGGATGGTG CGCGATAAGC TCATGGTCAA CCCCTGCCCT
CTGCAGATTC CCATGGGTCG TGAAGCAGCT TTCGAAGGCG TCATCGATCT TGTCGAAATG
CGCGCAGCGT TCTTCGATGG AGAAGACGGC GAAGTCGTTC GCTATGAAGA AATCCCTGCT
CAATATGCTG AGAAAGCTGC CGAAGCTCGT CTGTTCATGC TCGAGACACT CTCGATGTTC
AATGATGACG TGGCCATGGC GATTCTCGAA GAGCAGCCAC TCTCCGCTGA ACAACTCCGT
CCCATCATTC GCGATTGCAC GCTGACACAT AAGATCGTTC CTGTCATGAT GGGCACGGCT
TACAAGAACA AGGGTGTGCA GGAATTGCTC GATGCAGTGA CATACTACCT GCCCAGCCCG
CTGGATCGCG AACTGTCGGC CATGGACAAC GACATGAAGC CGCCAGCGGA TACTTCGGCC
CTTCAGCCAG GTTGGAACCG GGTACCGCTC TCGTCAGATC CTGCTAAGCC GCTCGTCTGT
ATGGCCTTCA AGACCGTTGT CGAGCAGTTT GGTCAGTTGA CTTACACCCG TATCTATCAG
GGCAAGATCA TTAAGGGTGA TAGCTATGTT AACACCCGTA CGGGCAAGCG AGTGCGCTTT
GGCCGACTGG TGCGCATGCA CGCCAACAGC CGTGAAGATA TTGAAACGGG TGAAGCTGGT
GACATTGTGG CTCTGGTGGG TGTTGATTGT GCATCGGGGG ATACGTTCTG CGCAGAAGGC
ACGAACTATT CGCTGGAAAG CATCTTCGTG CCTGACGCCG TGATCCGTCT CTCGATCGAG
CCAGTGAAGC GCGATGGGGC AGACAAGCTC GGCAAAGCTC TGGAACGTTT CCGCCGTGAA
GATCCGACTT TCCGCGTTTT GACTGACGAA GAAACTGGTC AGACGCTGAT TGCCGGTATG
GGGCAGTTGC ACCTCGATAT TTATGTAGAG CGCATCAAGC GAGAATATGG CGTCGAATGT
ATCGTTGGTC AGCCACGTGT GGCTTACCGC GAAACACCGA CCAAGAAGGT GGAATTCAAC
TGGAAGCACA AGAAGCAGAC CGGTGGTTCA GGTCAGTTTG CTCACATTGT GGGCTACCTG
GAACCATTGC CTGAAGACAG CGTGATGCCT TATGAATTCG TGAATGACGT TTCCGGTGGT
CGTATTCCGA AGGAGTATAT TGCTCCAACG GATAAGGGCT TCCAGCGCGG GATCGTCAAG
GGGCCACTCT GCGAGTGCGA AGTGGTGAAT GTCCGTATGG TTCTGCAGGA CGGCAGCTAC
CACGACGTCG ATTCTTCGGA AATGGCGTTC GACATCTGCG GTTTCGATTG TATGCGTGAT
ACGCTCAAGA AGGCCGATAT CGGTCTGCTG GAGCCGATCA TGAAGCTCGA AGTGGAAGTT
CCCGAAGAGT TCCAGGGTTC AGTGACAGGG CAGCTCTCCA GCAAGCGTGG TGTGATCAAT
TCCTCGGATA CCAACCTGGG AACTGCCGTC ATCAGTGCTG AAGTTCCTCT GTCCATGATG
TTCGACTATG CCAACGAACT GCGTTCGATG ACGCAGGGTA AGGGTACGTT CACCATGGAA
TTCAGCCGCT ACTCCATGCT GCCACGCAAC CTGGTCGACG AAGTGGTCGA AAAACGCAAG
AAGGAAAAAG CTGAACGTCT GGCAAAGACG TAA
 
Protein sequence
MDLSRYRNIG VSAHIDSGKT TLSERILFYS GRIHSIHEVK GKDGVGATMD HMELEREKGI 
TITSAATQVT WKDYTVNLID TPGHVDFTVE VERSLRVLDG AILVLCSVGG VQSQSLTVDR
QMKRYKVPRI AFINKMDRTG ANPEKVIGMV RDKLMVNPCP LQIPMGREAA FEGVIDLVEM
RAAFFDGEDG EVVRYEEIPA QYAEKAAEAR LFMLETLSMF NDDVAMAILE EQPLSAEQLR
PIIRDCTLTH KIVPVMMGTA YKNKGVQELL DAVTYYLPSP LDRELSAMDN DMKPPADTSA
LQPGWNRVPL SSDPAKPLVC MAFKTVVEQF GQLTYTRIYQ GKIIKGDSYV NTRTGKRVRF
GRLVRMHANS REDIETGEAG DIVALVGVDC ASGDTFCAEG TNYSLESIFV PDAVIRLSIE
PVKRDGADKL GKALERFRRE DPTFRVLTDE ETGQTLIAGM GQLHLDIYVE RIKREYGVEC
IVGQPRVAYR ETPTKKVEFN WKHKKQTGGS GQFAHIVGYL EPLPEDSVMP YEFVNDVSGG
RIPKEYIAPT DKGFQRGIVK GPLCECEVVN VRMVLQDGSY HDVDSSEMAF DICGFDCMRD
TLKKADIGLL EPIMKLEVEV PEEFQGSVTG QLSSKRGVIN SSDTNLGTAV ISAEVPLSMM
FDYANELRSM TQGKGTFTME FSRYSMLPRN LVDEVVEKRK KEKAERLAKT