Gene Plim_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2076 
Symbol 
ID9138779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2692065 
End bp2693093 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content55% 
IMG OID 
ProductL-threonine 3-dehydrogenase 
Protein accessionYP_003630102 
Protein GI296122324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0654334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGAC TGGTCAAGCG CAAGGCCGAT GTCGGACTCT GGCTGGAAGA TGTTCCCAAG 
CCCGAATACG GCATTAACGA CGTTCTCATT CGTGTCAAAA AGACGGGCAT CTGCGGCACC
GATGTCCACA TTTATAAATG GGATGACTGG GCTCAGAAGA CGATTCCCGT TCCCATGGTG
GTTGGACACG AGTTCGTGGG TGAAATCGTT GCGGTGGGTT CGAATGTCGT CGATTTCCAC
CCTGGCGACA TCGTCAGTGG GGAAGGGCAT GTGGTTTGTG GACGCTGCCG CAATTGCCTC
GCGGGTCGCA GGCACCTGTG TGCCTTCACT AAAGGTGTGG GAGTCAATCG TCCCGGTGCC
TTCGCCGAAT ACATTTCGCT CCCCATGTCG AATGTGTGGC ATCACTCCTC AGACATAGAC
CTGGATGTGG CGTCCATCTT CGACCCGTTC GGGAACGCTG TTCACACAGC CCTCTCCTTT
GACCTCCTCG GTGAAGACGT ATTGATCACA GGTGCCGGCC CGATTGGAAT CATGGCTACT
GCCATTGTGA GGCATGCCGG AGCTCGACAT GTGGTGGTCA CCGATTTGAA TCCTTACCGC
CTCGAACTGG CCCGCAAGAT GGGAGCCACC GTCGCTGTTG ATCCACGGGA GCAGGACTTA
CCTGCCGTCC AGGCACAGTT GGGCATGAAG GAAGGTTTCG ACGTCGGCCT CGAAATGTCT
GGTAATCCAC ATGCCTTCAA TAGTCTCATC GCCAATATGG CTCACGGCGG CAAGATTGCA
ATGCTTGGCA TCCCTGAAAA ATCCATGGCC ATCGACTGGA ACACCGTGGT CTTTAATATG
TTGACTATCA AAGGCATCTA TGGCCGGGAA ATGTACGAAA CCTGGTACAA GATGACCGTC
ATGCTCCAGA GCGGCCTGCA GATCGCCCCC GTCATTACTC ATCGCTACCA CTACACCGAA
TTCCAGAAGG GTTTCGATGT CATGCTCAGC GGCCAATGCG GCAAAGTCGT GCTCGACTGG
GAAACCTAA
 
Protein sequence
MHGLVKRKAD VGLWLEDVPK PEYGINDVLI RVKKTGICGT DVHIYKWDDW AQKTIPVPMV 
VGHEFVGEIV AVGSNVVDFH PGDIVSGEGH VVCGRCRNCL AGRRHLCAFT KGVGVNRPGA
FAEYISLPMS NVWHHSSDID LDVASIFDPF GNAVHTALSF DLLGEDVLIT GAGPIGIMAT
AIVRHAGARH VVVTDLNPYR LELARKMGAT VAVDPREQDL PAVQAQLGMK EGFDVGLEMS
GNPHAFNSLI ANMAHGGKIA MLGIPEKSMA IDWNTVVFNM LTIKGIYGRE MYETWYKMTV
MLQSGLQIAP VITHRYHYTE FQKGFDVMLS GQCGKVVLDW ET