Gene Plim_2073 details

Gene Information

• Locus tag: Plim_2073
• ID: 9138776
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2688082
• End bp: 2688777
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 54%
• Product: SNARE associated Golgi protein-like protein
• Protein accession: YP_003630099
• Protein GI: 296122321

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.520648
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTCTC TCAAGCAGAT CGTCGAATTC GTCCTGCACT TTGATAAGTA TCTCCAGGGG 
TTCATCGAAA ACTACGGCAC CTGGACCTAC GCGATTCTTT TCGCAATCGT CTTCGCTGAG 
ACGGGCTTGA TCTTCATGCC GTTTCTGCCG GGGGATTCTC TGTTGTTTGC AGCAGGGGCC 
TTGGCGGGAG CCAGTTCGCT CTCATTGCCG GCCCTGTGGA TATTGTTGAC GATTGCGGCC 
ATTGCAGGCG ATGCCGTGAA CTACCTGGTC GGCCGCTGGT TTGGAGAACG CTTACTGAGC 
GCAAAAAGAT TTCGGCTGGT CAAACCCGAA CATCTCACGA AGACGGAAGA ATTCTTTCAG 
AAGTACGGCA GCAAAACGAT TGTCATCGCG CGGTTTGTCC CGATTGTCCG CACGGTGGCA 
CCATTTGTCG CGGGCATGGG CAAAATGCCC TATCGCGTCT TTTCTGTTTA CAACATTGCA 
GGTGGTATTC TCTGGGTTTC CACCTGTCTG ATCGCCGGTT ATCTCTTTGG CGGCCTGCCA 
TTCGTCAAGG ACAATTTTTC GCTGGTCGTT CTCGGCATTG TTATTGTCTC TGTCCTGCCC 
ATTGCCTGGG AACTGGCTGC CGGTTATCTC CGTGGGCGAA AAGCAGTAGC AGCACCAGCA 
CCCGAGACCA CATCTTCTCC CGAAGAACCC GTCTAA 

 

Protein sequence

MDSLKQIVEF VLHFDKYLQG FIENYGTWTY AILFAIVFAE TGLIFMPFLP GDSLLFAAGA 
LAGASSLSLP ALWILLTIAA IAGDAVNYLV GRWFGERLLS AKRFRLVKPE HLTKTEEFFQ 
KYGSKTIVIA RFVPIVRTVA PFVAGMGKMP YRVFSVYNIA GGILWVSTCL IAGYLFGGLP 
FVKDNFSLVV LGIVIVSVLP IAWELAAGYL RGRKAVAAPA PETTSSPEEP V