Gene Plim_2049 details

Gene Information

• Locus tag: Plim_2049
• ID: 9138752
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2662434
• End bp: 2663207
• Gene Length: 774 bp
• Protein Length: 257 aa
• Translation table: 11
• GC content: 55%
• Product: triosephosphate isomerase
• Protein accession: YP_003630076
• Protein GI: 296122298

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCGCC TGTTTGTGGC TGGCAACTGG AAAATGAATA CCAACCTTGC CAGTGGCAAA 
GAACTTGCCA AAGGTGTGGC TGCCGAAGCT CAGCGTCTGG GTGATGCGAT CGACATTGCC 
GTTTGCCCAC CGTTTGTCTA TTTGAGCAAC GTTAAAGCCG AGCTGGCAGG TTCGAAAGTG 
CAGCTTGGTG CCCAAAATAC ATGGTTTGCA GCTCCCGGTG CCTTTACGGG AGAAACCGCT 
GTTGAAATGC TCAAAGATAT TGGCTGCTCC TGGGTGATTC TCGGCCACAG TGAAAGGCGT 
CAGCTGCTCG GCGAGAAGGA CGAACTGATC AACAAAAAGA TCGCAGCTGC GACTTCCGAA 
GATTTAGGCG TCATTTTCTG TGTGGGCGAA CTGCTCGAAG ATCGTCAGGC AGGGCGGACT 
GAAACCGTTC TGGAAACCCA GCTTTCAGGC GGACTGGCAA ATCTGGATGC AGCCGTTCTT 
GGTCAGATCG TTATTGCGTA TGAACCTGTC TGGGCCATTG GCACTGGAGT GACAGCCACT 
CCGGAACAGG CTGAGGGCGC CCACGCCTTC ATTCGCGGCT GGTTAACGAA GCAGTACGGT 
GCCAAAGTGG CTGACAGCGT GCGAATTCTT TACGGCGGTA GTGTCAAGGC TGACAATGCC 
GAGGCCTTGA TGTCTTTGCC GAACGTCGAT GGGGCTCTGG TCGGAGGAGC CAGTCTGACA 
ACTGCTCAGT TTGCTCCCAT CCTGCAGGCT GCGGCCCTAG TGGCCTCGCG CTGA 

 

Protein sequence

MRRLFVAGNW KMNTNLASGK ELAKGVAAEA QRLGDAIDIA VCPPFVYLSN VKAELAGSKV 
QLGAQNTWFA APGAFTGETA VEMLKDIGCS WVILGHSERR QLLGEKDELI NKKIAAATSE 
DLGVIFCVGE LLEDRQAGRT ETVLETQLSG GLANLDAAVL GQIVIAYEPV WAIGTGVTAT 
PEQAEGAHAF IRGWLTKQYG AKVADSVRIL YGGSVKADNA EALMSLPNVD GALVGGASLT 
TAQFAPILQA AALVASR