Gene Plim_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2006 
Symbol 
ID9138708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2602130 
End bp2602891 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630034 
Protein GI296122256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.398772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCA CTGATCTTTG GACTCGTGAT CAACTCCTTT TGGCACTTCG GCTCTATTTA 
CGGCTGCCGT TCGGGAAGTT GCATCGACTC AACCCAGAGA TCATTGAACT CGCAAAACTC 
ATAGGTCGCA CGCCTAATGC GTTGGCAATG AAGGCATGCA ACTTCGCGAA CCTTGATCCC 
GAACTTCAAG CTCGTGGAAT TCGTGGCTTA TCGAATCTCA GCAATGCAGA TCGCGAAATC 
TGGATGGAGT TCTTAACCAA TGCTGAGGGC CTAGCTTCCG AAGCGGAAGA GGCTGCTGAA 
CGAATTGCAG GTGTCGCCAT AATTGACCTG CCAGATCTCC GCCTGCCGAC GGGCCCGACC 
GACTTCGAGC GAACCGTGCG AACACGCCGG GTTCAGTCCT TCTTCCGGGC TGCCGTGTTG 
ACTACCTACA ACTCCAGATG CGCGATCTCA GGAGTCGCTG GTGCCGAACT CCTGACGGCG 
AGTCACATCA TTCCATGGAG CGAATCCATA GAGCGTCGTG CCGACCCCCG TAATGGTTTG 
TGTCTCAACG CACTTTTAGA CCGAGCGTTC GACCGGGGAT TGTTTTCGCT GGATGACAAC 
TTGCGTGTGA TCGTTTCACG ACGCCTGATC GACAACGTGG CAGACGCGAA GCTGAAGTGC 
TCACTGGATG AAATCGAGGG AAGTCCACTC GCCATACCAT CCAGGTTCCG ACCGGACCCA 
GAGGCCATTC GCTTTCATAG GGCTAAGGTT TTCCAACCCT AG
 
Protein sequence
MARTDLWTRD QLLLALRLYL RLPFGKLHRL NPEIIELAKL IGRTPNALAM KACNFANLDP 
ELQARGIRGL SNLSNADREI WMEFLTNAEG LASEAEEAAE RIAGVAIIDL PDLRLPTGPT 
DFERTVRTRR VQSFFRAAVL TTYNSRCAIS GVAGAELLTA SHIIPWSESI ERRADPRNGL 
CLNALLDRAF DRGLFSLDDN LRVIVSRRLI DNVADAKLKC SLDEIEGSPL AIPSRFRPDP 
EAIRFHRAKV FQP