Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1917 |
Symbol | |
ID | 9138619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2501908 |
End bp | 2502873 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | type II secretion system protein |
Protein accession | YP_003629946 |
Protein GI | 296122168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.258716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCAC TAATGATATC GCTGACAGTT TTCGTGGGTG TCTCTGCCTT CGTGGGTGCC ATCGCTTCAC TGCTCATGGG TGGAAATTCC AAACGTGCAG AAGACCGTCT GGATGTACTT GCCGGTCTGA AAACCAGTGA AGAGCAAACC AAGATCACCA AAGATGAACT CGTTAAGCTC AGCTCTCAGA CCATTGATGG TGCACTGGGA TTGCTGATGG AGCGATTTCG CGGGATCGGT CTCTTTTTTG AACAGGCCGA TTCTCCGATT GGTTTAAGAT CGTTTTTGCT GATCAGTGTT TCCTGTGGAA TTGTGGGTGC CGCTCTGGGA TTGATTGGCA ATGCGCCCAC TCCACTCCTC CCGTTATTTG GCTTGCTGAC ATCCACGTTT CCATTCATCT GGCTGTCGTT TCGACGCAAG AAGCGATTCA AGCAGTTTGC CAAACAGCTC CCCGATGCCA TGGAATTGAT GGGCCGGGCA TTGCGATCAG GTCACAGCCT GGCATCAGGT CTGCATCTGG TCTGCGATGA AATGCCTCCA CCGATTTCAC AAGTCTTTCG CAGTGCTTAT GAAACTCAAA ATCTTGGCGT TCCCGTCGAA AGTGCCTTGA AAGAGTCCCT CAAGAAAATG CCCAACCTGG ACTACAAATT TTTTGTGACA GCTGTGGCAA TTCAACGGCA AACCGGCGGT GACCTGGCCG AGATTCTCGA CAAGATCAGT GAAGTGATCC GCGAGCGATT CAAAATCCTC GGAACAGTTC AGGCTTTAAC AGGTGAAGGC CGCTTAAGTG GTGCTGTGCT GATGGCCATG CCGATTGCCA TCTTCTTTGC GGTCTACTAC CTGAATCCCA ATTACGTCAT GGTGCTGTTC ACCACCGACC TCGGCAAAAA GATGATTGCT GTCGGGATCG TGATGCAGAT TCTGGGCGCC GTCGCCATCA AGAAAATTAT CGACATCAAA GTGTAA
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Protein sequence | MSPLMISLTV FVGVSAFVGA IASLLMGGNS KRAEDRLDVL AGLKTSEEQT KITKDELVKL SSQTIDGALG LLMERFRGIG LFFEQADSPI GLRSFLLISV SCGIVGAALG LIGNAPTPLL PLFGLLTSTF PFIWLSFRRK KRFKQFAKQL PDAMELMGRA LRSGHSLASG LHLVCDEMPP PISQVFRSAY ETQNLGVPVE SALKESLKKM PNLDYKFFVT AVAIQRQTGG DLAEILDKIS EVIRERFKIL GTVQALTGEG RLSGAVLMAM PIAIFFAVYY LNPNYVMVLF TTDLGKKMIA VGIVMQILGA VAIKKIIDIK V
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