Gene Plim_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1917 
Symbol 
ID9138619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2501908 
End bp2502873 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content50% 
IMG OID 
Producttype II secretion system protein 
Protein accessionYP_003629946 
Protein GI296122168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.258716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCAC TAATGATATC GCTGACAGTT TTCGTGGGTG TCTCTGCCTT CGTGGGTGCC 
ATCGCTTCAC TGCTCATGGG TGGAAATTCC AAACGTGCAG AAGACCGTCT GGATGTACTT
GCCGGTCTGA AAACCAGTGA AGAGCAAACC AAGATCACCA AAGATGAACT CGTTAAGCTC
AGCTCTCAGA CCATTGATGG TGCACTGGGA TTGCTGATGG AGCGATTTCG CGGGATCGGT
CTCTTTTTTG AACAGGCCGA TTCTCCGATT GGTTTAAGAT CGTTTTTGCT GATCAGTGTT
TCCTGTGGAA TTGTGGGTGC CGCTCTGGGA TTGATTGGCA ATGCGCCCAC TCCACTCCTC
CCGTTATTTG GCTTGCTGAC ATCCACGTTT CCATTCATCT GGCTGTCGTT TCGACGCAAG
AAGCGATTCA AGCAGTTTGC CAAACAGCTC CCCGATGCCA TGGAATTGAT GGGCCGGGCA
TTGCGATCAG GTCACAGCCT GGCATCAGGT CTGCATCTGG TCTGCGATGA AATGCCTCCA
CCGATTTCAC AAGTCTTTCG CAGTGCTTAT GAAACTCAAA ATCTTGGCGT TCCCGTCGAA
AGTGCCTTGA AAGAGTCCCT CAAGAAAATG CCCAACCTGG ACTACAAATT TTTTGTGACA
GCTGTGGCAA TTCAACGGCA AACCGGCGGT GACCTGGCCG AGATTCTCGA CAAGATCAGT
GAAGTGATCC GCGAGCGATT CAAAATCCTC GGAACAGTTC AGGCTTTAAC AGGTGAAGGC
CGCTTAAGTG GTGCTGTGCT GATGGCCATG CCGATTGCCA TCTTCTTTGC GGTCTACTAC
CTGAATCCCA ATTACGTCAT GGTGCTGTTC ACCACCGACC TCGGCAAAAA GATGATTGCT
GTCGGGATCG TGATGCAGAT TCTGGGCGCC GTCGCCATCA AGAAAATTAT CGACATCAAA
GTGTAA
 
Protein sequence
MSPLMISLTV FVGVSAFVGA IASLLMGGNS KRAEDRLDVL AGLKTSEEQT KITKDELVKL 
SSQTIDGALG LLMERFRGIG LFFEQADSPI GLRSFLLISV SCGIVGAALG LIGNAPTPLL
PLFGLLTSTF PFIWLSFRRK KRFKQFAKQL PDAMELMGRA LRSGHSLASG LHLVCDEMPP
PISQVFRSAY ETQNLGVPVE SALKESLKKM PNLDYKFFVT AVAIQRQTGG DLAEILDKIS
EVIRERFKIL GTVQALTGEG RLSGAVLMAM PIAIFFAVYY LNPNYVMVLF TTDLGKKMIA
VGIVMQILGA VAIKKIIDIK V