Gene Plim_1898 details

Gene Information

• Locus tag: Plim_1898
• ID: 9138600
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2476366
• End bp: 2476935
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 50%
• Product: Elongation factor P
• Protein accession: YP_003629927
• Protein GI: 296122149

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.185446
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTTA AGCTGGCAGG CGACCTGCAG TCGGGCAATG TGGTGATCGT CGAAGGAAAT 
CCCCTTGTTG TTTTGAAAGC CCAGTACAAC AAGTCAGGTC GCAACGCTGC CGTTGTCAAA 
CTGCGGATGA AGAACCTGTT GACAGGTCGC GTCTCAGAAA CGGTCGTCAA AGCCGACGAA 
AAAATGGAAC AGATCATTCT CGACAAGAAA GAATGTACCT ATTCCTACTC AGCTCCACCG 
GTTCACGTGT TCGTTGACGG CGATTACAAC CAGTACGAGA TCGATGCCGA AACGATGGCT 
GATGTTGAAA AATACCTCAT GCCGGAAATG ACAGATGTCG TCGAAGTGAC ATTCTACGAA 
AGTAAGCCAA TTTCTGTGGT CTTCCCGAAG GTCATCATTC GCGAAGTTGA ATACACCGAA 
CCTGTGACCC GCGGTGATAC CTCAGGAAAG ATTACCAAGG CAGCGGTCCT TAAGCACTCA 
AAGTACGAGC TTCAGGTTTC GGCCTTCGTA GAAATTGGCG ACAAGATTGA AATTGATACG 
GAGACCGGCG AGTTCCGCCG CCGCTGCTAA 

 

Protein sequence

MSVKLAGDLQ SGNVVIVEGN PLVVLKAQYN KSGRNAAVVK LRMKNLLTGR VSETVVKADE 
KMEQIILDKK ECTYSYSAPP VHVFVDGDYN QYEIDAETMA DVEKYLMPEM TDVVEVTFYE 
SKPISVVFPK VIIREVEYTE PVTRGDTSGK ITKAAVLKHS KYELQVSAFV EIGDKIEIDT 
ETGEFRRRC