Gene Plim_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1896 
Symbol 
ID9138598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2474578 
End bp2474994 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content55% 
IMG OID 
ProductProtein-tyrosine phosphatase, low molecular weight 
Protein accessionYP_003629925 
Protein GI296122147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0515546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG TACTCATTCT TTGCACGGGA AACTCCTGCC GCTCGCAAAT GGCCGAAGGT 
TTATGGAACA CTCTGGGCCA GCCTACGTGG GAAGCGGTCT CGGCAGGCTC ACGTCCTGCC
GGCTACGTTC ATCCGCTGGC CGTGCGAGCC ATGGGAGAAC TGGGGATCGA TATTTCGAAC
CTCGTGAGTA AGTCGGTCGC ACCGTATCAG AATGAAAACT TCGACCTGGT GGTCACGGTG
TGCGATAACG CCAAAGAGGC ATGCCCTGTA TTCCCAGGAG CGAAACTCAC GCTGCATTGG
CCATTTGCAG ACCCGGCCCA CGCCGAAGGA AACGACGAGG AAAAGATGGT CATGTTCCGC
CGTGTGCGTG ATGAAATCCG TGATACCATC AGTGGCTATC TCAAAACTGT CTCTTGA
 
Protein sequence
MKRVLILCTG NSCRSQMAEG LWNTLGQPTW EAVSAGSRPA GYVHPLAVRA MGELGIDISN 
LVSKSVAPYQ NENFDLVVTV CDNAKEACPV FPGAKLTLHW PFADPAHAEG NDEEKMVMFR
RVRDEIRDTI SGYLKTVS