Gene Plim_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1881 
Symbol 
ID9138583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2456371 
End bp2457843 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content57% 
IMG OID 
Productsulfatase 
Protein accessionYP_003629910 
Protein GI296122132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGATCA TGACGCGATT CCTGACCACG TCCATCCGAC AATTTACGAT GCGGGTGGCG 
ATACTCTGCT TGACGCTCTG GCTGCCTCTT CACGCCGATT CCTTAGCAGC TGAAAGCCGC
CGGCCACCGA ACATCATTCT CATCCTGATG GATGACATGG GCTGGCGCGA TGTCGGATTC
ATGGGAAACA AGTTCGTCGA GACGCCTCAT ATCGACCGTT TGGCAAAGAC CGGCTTGGTG
TTTACCCAGG CCTACGCCAG CGCCCCCAAC TGCGCCCCGA CGCGTGCATG TCTGATGTCG
GGCCAGTACG CGCCCAGGCA CGGAATCTAC ACCGTCGTCG ATCCTCGTCA GCCACCCGGT
TCGCCCTGGC ATAAGTGGCA GGCAGCAGAA AGCAAATCAG AACTCGACAC GAACGTCGTC
ACCATCGCCG AAGCGCTGCG GGATGGGGGC TATGCGACCG CATTCTTTGG CATGTGGAAC
CTCGGACGCG GTCGCACCGG GCCAGTCACA CCAGGCGGTC AAGGTTTCCA GAAAGTCGTC
TTTCCAGAAA ACCTTGGCTT CGGCAAAGAT GAGTATTTTG ATGATGGCAA GCACTACTTG
ACTGATCGGT TGACCGATGA AGTTCTCAAA TTCGTGGACG AGCATCGCGA GCAGCCATTC
TTCGTTTATC TCCCCGATCA TGCCATCCAT GCACCATTCA ATCCCAAGCC GGAGTTACTG
GCGAAATACG AGCGAAAGGC GGCAGCGAGC AACGATCGTC GCGACGATCC TGCTTGTGCG
GCGACGATCG AGGCCGTCGA TCACAACGTG GGACGAATCA TGGATCACCT CAAACGGTTA
AAGCTGTCCG ATAACACAGT CGTGATCTTT ACCTCAGACA ATGGCGGCAC CCAGCAATAC
ACACCGCCGC TACGAGGTGG CAAAGGCGAA CTCTATGAAG GTGGCATTCG CGTCCCGCTG
GTTGTCGCCG GACCAGGAGT CAAGAGCCTC GGCAGCAGAT GCGATGTGCC GGTGTCGAGC
ATTGATTTAT ATCCGACGCT GCTCGAACTG GCGGGTATCA AGCCGCCTGA AGGACAAGTG
CTTGACGGCG TCAGCCTCGC CCCGCTTCTT CAAGGCGATG CAACGCTCGA CCGTGAGCGA
CTCTTCTGGC ACTTCCCGTG CTATGTCGGC AAAGCGACTC CGTCGAGTGC CATGCGAGAA
GGGGATTTCA AGCTGATTGA GTTCTTTGAA GAAGGGGGAC GCGTCGAACT CTTCAATCTG
AAAAACGATC CAAACGAGGA GAAAAACCTT GCCTCCGTGA TGCCCGACAA GGCCGCCGCA
CTCGCGAAGA CGCTACGGGC ATGGCAAAAG AAAACCAACG CATCCATTCC GCCTGGTCCC
AATCCCAGCT ACGACCCCCA AGCCGAACGC CCGCGCGGCA ATCAAGGCGG AGGGAGACCA
GATAAGCCGA AACGCGGTCG GCAACAACAA TGA
 
Protein sequence
MTIMTRFLTT SIRQFTMRVA ILCLTLWLPL HADSLAAESR RPPNIILILM DDMGWRDVGF 
MGNKFVETPH IDRLAKTGLV FTQAYASAPN CAPTRACLMS GQYAPRHGIY TVVDPRQPPG
SPWHKWQAAE SKSELDTNVV TIAEALRDGG YATAFFGMWN LGRGRTGPVT PGGQGFQKVV
FPENLGFGKD EYFDDGKHYL TDRLTDEVLK FVDEHREQPF FVYLPDHAIH APFNPKPELL
AKYERKAAAS NDRRDDPACA ATIEAVDHNV GRIMDHLKRL KLSDNTVVIF TSDNGGTQQY
TPPLRGGKGE LYEGGIRVPL VVAGPGVKSL GSRCDVPVSS IDLYPTLLEL AGIKPPEGQV
LDGVSLAPLL QGDATLDRER LFWHFPCYVG KATPSSAMRE GDFKLIEFFE EGGRVELFNL
KNDPNEEKNL ASVMPDKAAA LAKTLRAWQK KTNASIPPGP NPSYDPQAER PRGNQGGGRP
DKPKRGRQQQ