Gene Plim_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1874 
Symbol 
ID9138576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2447031 
End bp2449718 
Gene Length2688 bp 
Protein Length895 aa 
Translation table11 
GC content58% 
IMG OID 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_003629903 
Protein GI296122125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.743469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATG CTCGTCCCAA TCCTGATGAT CTGCTGGCCA AGGTGCAGGC CGAAGATACT 
GAGTCCACGC GTGGCTCGCT CAAAGTATTC TTCGGCTACG CTGCCGGTGT CGGGAAAACT
TATACGATGC TGGAAAATGC TCAGCGAGCG AAAGCGGCTG GGCGTGAGGT CGTCGTCGGT
TATGTTGAAC CACACGGTCG CCCGGAAACG GAGGCATTGC TCGCTGGTCT CGAAGTCCTT
CCGCTGCGTG AGTTTGAGTA TCGTGGCGTG AGGCTGCGAG ACTTTGATGT CGATGCCGCT
CTGGCTCGAA ATCCCGACCT GCTGTTGGTA GACGAACTCG CCCATACGAA CGCGGTCGGC
TGTCGCCATG AGAAACGCTG GCAGGATGTC GAAGAGCTTC TCGAAGCCGG GATCAATGTC
TGGACAACGC TGAATGTTCA GCACATTGAG AGCCTGAATG ACGTCATCGG CCAGATCACG
GGCGTCACCG TGCGAGAGAC GGTTCCCGAC CGGGCGTTTG ATCTGGCGGA CGATCTGGAA
CTTGTCGACA TCACACCAGA AGAATTGCTA CACCGACTCA AGGCAGGCAA AGTCTACGTT
CCCGATCAGG CTCAACGAGC GATTCAAAGC TTCTTCCAGA AGTCGAACCT TACCGCACTT
CGGGAACTTT CGCTGCGACA GGCGGCTCGA CGCATTCACA CCGATGTTGA GTCGGCTCGG
CGAGAGAAGG CGGCAATCCA GCCGTGGGCC ACTGCCGAGC GGCTGCTGGT CTGCGTGGGG
CCGAGCCCCA CGACCGCACG TGTCATTCGC ACCGCTCGAC GGATGGCGGC GGCTCTCGAT
GCACCTTGGC TGGCGGTTTC TGTTGATCTC ACCGGCGAAC CAGCGAGCAG TCCTCGAAAG
CAGCAGGTCA GCCAGCATTT CCGCCTCGCC GAACGCCTGG GAGCGGAAAC GGTCACATTG
GCTGGGCAGA ACGTCTCGGA AACGATTCTC GACTATGCGC GTTCTCGCAA CGTCACCAAG
ATACTGATCG GCAAGACGAA TCAGCCTCGC TGGCGGCGAC TGCTCGCTGG CACCGTCGTG
GATGACTTGC TTGAAAAGAG CGGCGACATC GACGTGTATG TCATTCGCGG CGAGGAAGAG
AAAACAGCAC ACGCTCCCGC CCGAACAGCA TCGACTACTC AAAAGCTCCC GTACTTCTGG
GCGGTTGGAC TCGTCAGTCT GACCGGGTTG CTCGCTTACG GACTTCGCTT TCTGCATCTC
GCTGATGCGG AAGCAAACAC AGTGATGTTA TTCCTGGCGG CAGTCGCCTG GACTGCCTTC
CGTTATGGCC GGGGGCCAGC CGTGTTTGCG AGCGTGCTGG CCGTGCTGGT TTTCGATTTC
TTCTTCGTCG CACCGTTCCA CACCTTCGCC GTCGCCGATA CGCAGTATGT TGTTACGTTT
GCGGTCATGC TGACCATCGG GCTGGTGATC AGCACGCTGA CATCTCGACT CCGGGCACAG
ATCGAGAACA CTCGCCTGCG AGAGCGACGG ACTTCTTCGC TTTACGAACT AGGCAAGCAA
CTGAGTTCTT TGTACGGGAA TGTGTTTCTC GTCGGAGCGG CAGGTGGCAA GGTCGCCGAG
ATGGTGGGCG GTGAAGTGGC GATCTACTTA CGTCAGCCAT CCGGCCCGCC CGAACTCGCT
TTCGGGCATG ACACCACAAT TGTCAAGCAT TCAGTGAGTC TACCCGTGGC ACAGTGGGTC
ATTGAACATG ATCAACTTGC AGGGGCCGGT ACGAATACAC TTCCCAATGC CGCGGCCCTG
TTCTTCCCTT TGACCGGCTC ACAAGGCACA CACGGTGCGA TTGCTATTCG AGTGCCGGAC
ACCGAGCGAT TGCTCGACCC CGAATTCCGC CGTCTTCTGG ATGCGTGTGC CAATCAACTG
GCGTTGGCAC TGGAACGAGA CCAACTCGCT ATCGAGGCCG CAAACGCTCG CATTCAGGCG
GAAGCCGAAC AAGTCCGGAG CAGCCTGCTC AGTAGCGTGT CTCACGACCT CAAAACTCCC
CTGGCAGCCA TTGCCGGGGC CAGCAGCAGC TTGTTGGAAG CCACGTCGCT GGACGAAGAG
ACACGCCGTC AGTTGCTCGA GACCGTGGCC GATGAAGCGG CACGTCTGAA TCGTCTCCTC
GAAAACATCC TTCAGATGTC GAAGCTGGAT GCAGGGGCAG CAGTTCCCCT TTGCCAATGG
CACGTCTTGG AAGAACTGGT TGGCTCGGCA CTCCATCGCA CTCGTCGTGA ACTGGCCCAG
CATGACGTTG CTGTCCAACT CTCAAGCGAA CTGCCGCTCT TGTACGTTGA TGGACTGCTT
ATGGAACAGG TGTTTGTCAA TCTTTTCGAG AATGCGGCAC GTTATACACC GGAGGGAACG
AAAGTGACAA TCCGGGCGGC GCTCGATGGT GATCACGTGC GGATCGGTAT TTCGGATAAC
GGGCCGGGAC TGCCTGCCGG TGCCGAGGAG CGAATCTTCG ACAAGTTCTA TCGAGCGTCT
CCAACGGCTG ATGGTGGTCG AGGCAGTGGT CTTGGACTCG CCATCTGCCG GGCTATTATC
AAGGCCCACG GCGGCACTCT CGTCGCTGCC AACCGACCCG GTGGCGGTGC CGAATTCGTG
ATCCGTTTAC CGGTTTCGAA GGATGCACCG CAAGTCATGG TAGAATAG
 
Protein sequence
MPDARPNPDD LLAKVQAEDT ESTRGSLKVF FGYAAGVGKT YTMLENAQRA KAAGREVVVG 
YVEPHGRPET EALLAGLEVL PLREFEYRGV RLRDFDVDAA LARNPDLLLV DELAHTNAVG
CRHEKRWQDV EELLEAGINV WTTLNVQHIE SLNDVIGQIT GVTVRETVPD RAFDLADDLE
LVDITPEELL HRLKAGKVYV PDQAQRAIQS FFQKSNLTAL RELSLRQAAR RIHTDVESAR
REKAAIQPWA TAERLLVCVG PSPTTARVIR TARRMAAALD APWLAVSVDL TGEPASSPRK
QQVSQHFRLA ERLGAETVTL AGQNVSETIL DYARSRNVTK ILIGKTNQPR WRRLLAGTVV
DDLLEKSGDI DVYVIRGEEE KTAHAPARTA STTQKLPYFW AVGLVSLTGL LAYGLRFLHL
ADAEANTVML FLAAVAWTAF RYGRGPAVFA SVLAVLVFDF FFVAPFHTFA VADTQYVVTF
AVMLTIGLVI STLTSRLRAQ IENTRLRERR TSSLYELGKQ LSSLYGNVFL VGAAGGKVAE
MVGGEVAIYL RQPSGPPELA FGHDTTIVKH SVSLPVAQWV IEHDQLAGAG TNTLPNAAAL
FFPLTGSQGT HGAIAIRVPD TERLLDPEFR RLLDACANQL ALALERDQLA IEAANARIQA
EAEQVRSSLL SSVSHDLKTP LAAIAGASSS LLEATSLDEE TRRQLLETVA DEAARLNRLL
ENILQMSKLD AGAAVPLCQW HVLEELVGSA LHRTRRELAQ HDVAVQLSSE LPLLYVDGLL
MEQVFVNLFE NAARYTPEGT KVTIRAALDG DHVRIGISDN GPGLPAGAEE RIFDKFYRAS
PTADGGRGSG LGLAICRAII KAHGGTLVAA NRPGGGAEFV IRLPVSKDAP QVMVE