Gene Plim_1872 details

Gene Information

• Locus tag: Plim_1872
• ID: 9138574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2444370
• End bp: 2446433
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 59%
• Product: K+-transporting ATPase, B subunit
• Protein accession: YP_003629901
• Protein GI: 296122123

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAAAA CATCAACAAC ACTGTTTGAT CGCAAAATTC TCAGTGATGC CGTCAGGGCG 
TCGTTCTTGA AGCTCGATCC CCGTGTGCAG CTTCGCAATC CGGTGATGTT CGCCGTCTAC 
CTGGGCAGCA TCCTGACAAC GATTCTGTGG CTGAACTCGC TGAGCGGATC GACCGGCGAA 
TCATCAACCT TCGTGCTTGG CGTGGCCGTG TGGCTATGGT TCACCGTGCT GTTTGCCAAC 
TTCGCTGAGG CCATCGCTGA AGGCCATGGC AAGGCCCAGG CGGCTTCTCT CAAGAAGAGT 
CGCACAACGG TCATAGCCCG CAAGATCGCC AATAAGGCAG ATCGGATCAC CGAAGAAGTT 
CCGGCGACCG ACCTCAAGAT CGGCGACATC GTGATTGTCA AAGCGGGCGA AACGATACCG 
GCGGACGGCG AAGTCATTGA GGGAGTCGCC TCGGTCGATG AGAGTGCCAT CACTGGCGAA 
AGTGCTCCGG TTGTGCGAGA GAGCGGCGGC GACCGCAGTT CGGTGACCGG AGGGACACGA 
GTGATTTCTG ACTGGCTTAT TATCCAGGTG AGGACGCTCC CCGGCCAAAG TTTTCTCGAC 
CGTATGATTG CGATGGTCGA AGGTGCCAAG CGGCAGAAAA CTCCCAACGA GATCGCCCTC 
GCAATTCTGT TAGCCGCCCT GACCCTGATC TTTCTGCTCG TGGTGGCCAC GCTGCTCCCC 
TTTTCGATCT TCAGTGTTGA AGTTTCCGGC CAGGGAAGGG CAATCAGTCT CACGGTGCTG 
GTGGCTCTCT TCGTGTGCCT TGCACCCACC ACCATCGGGG CGTTGCTGTC CGCCATTGGC 
ATTGCCGGAA TGAATCGCCT CAGTCAGGCG AATGTCATCG CCATGTCGGG CAGGGCGGTC 
GAAGCGGCGG GTGACGTGGA TGTGCTGCTG CTCGACAAGA CAGGCACGAT CACGCTCGGC 
AACCGTCAGG CGACTCGCTT CATTCCGGCG TCGGTAACCA CCGAGAAGGA ACTGGCCGAC 
GCAGCCCATT TGGCATCGTT GGCGGACGAA ACCGCCGAAG GACGCAGCAT CGCTGTTCTG 
GCAAAGAAGC AGTTCGGTCT GCGAGGCCGG GAATTGGAAC AGATCCGGCC GCACTTCGTT 
CCGTTCTCGG CTCGGACTCG GATGAGCGGC GTGACGCTCG ATGGCCATTC GATTCGTAAA 
GGGGCCGCCG AAGCTGTCGA GACGCACGTG AGAAGCCTTG GCGGATTCCT GCCGGAAGAT 
GTCCGAGGTG CCGTTCAGGA GATCGCCAAG TCCGGTGGGA CGCCGCTGGT CGTCAGCCGG 
GACGACAAAG TGCTTGGTGT GATCGAACTT AAGGACATTG TGAAAGGGGG CATCAAGGAG 
CGGTTCGCAG AACTGCGGCA GATGGGGATC AAAACCGTGA TGATCACGGG CGACAATCCC 
TTGACTGCCG CCGCCATTGC CGCCGAGGCG GGCGTGGATG ATTTTCTGGC CGAGGCGACT 
CCCGAAGCCA AGCTGTCACT CATCCGGGAT TACCAGAAGG GCGGACGCCT TGTGGCGATG 
ACCGGCGACG GCACGAACGA CGCACCGGCT CTGGCTCAGG CCGACGTGGC GGTCGCCATG 
AACAGCGGCA CGCAGGCTGC CAAGGAAGCC GGGAACATGG TCGATCTTGA CTCCAATCCT 
ACGAAACTGA TCGAGATCGT GAACATCGGC AAGCAGCTGT TAATGACTCG CGGCTCACTG 
ACAACGTTCA GCATCGCTAA CGACGTCGCC AAGTATTTTG CGATTCTTCC GGCGGCATTC 
GCAGCGACTT ATCCGGCCCT CAAGGCGTTA GACCTGATGC GATTGTCGTC TCCTTCCAGT 
GCCATCCTTT CGGCGGTCAT TTTCAACGCT TTAATCATCA TCGCCCTGGT GCCGCTAGCG 
TTGAAGGGTG TGGCCTACCG ACCGGTGGGA GCGGCTCAAC TGCTTCGCAA TAATCTGCTC 
ATTTACGGTG TGGGTGGATT GATTGTGCCG TTCATTGGCA TCAAATCCAT TGACATGCTG 
CTGTCCGCCG TGGGCTTGGC ATAA 

 

Protein sequence

MTKTSTTLFD RKILSDAVRA SFLKLDPRVQ LRNPVMFAVY LGSILTTILW LNSLSGSTGE 
SSTFVLGVAV WLWFTVLFAN FAEAIAEGHG KAQAASLKKS RTTVIARKIA NKADRITEEV 
PATDLKIGDI VIVKAGETIP ADGEVIEGVA SVDESAITGE SAPVVRESGG DRSSVTGGTR 
VISDWLIIQV RTLPGQSFLD RMIAMVEGAK RQKTPNEIAL AILLAALTLI FLLVVATLLP 
FSIFSVEVSG QGRAISLTVL VALFVCLAPT TIGALLSAIG IAGMNRLSQA NVIAMSGRAV 
EAAGDVDVLL LDKTGTITLG NRQATRFIPA SVTTEKELAD AAHLASLADE TAEGRSIAVL 
AKKQFGLRGR ELEQIRPHFV PFSARTRMSG VTLDGHSIRK GAAEAVETHV RSLGGFLPED 
VRGAVQEIAK SGGTPLVVSR DDKVLGVIEL KDIVKGGIKE RFAELRQMGI KTVMITGDNP 
LTAAAIAAEA GVDDFLAEAT PEAKLSLIRD YQKGGRLVAM TGDGTNDAPA LAQADVAVAM 
NSGTQAAKEA GNMVDLDSNP TKLIEIVNIG KQLLMTRGSL TTFSIANDVA KYFAILPAAF 
AATYPALKAL DLMRLSSPSS AILSAVIFNA LIIIALVPLA LKGVAYRPVG AAQLLRNNLL 
IYGVGGLIVP FIGIKSIDML LSAVGLA