| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1801 |
|---|
| Symbol | |
|---|
| ID | 9138502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2338970 |
|---|
| End bp | 2340019 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | ATPase associated with various cellular activities AAA_3 |
|---|
| Protein accession | YP_003629830 |
|---|
| Protein GI | 296122052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA GCGGTGCCGC CCTGGATATG GCAATCGAAA AACTGACAAA CGCTCATCGA
TCGATTCGAG AGCAGATGTC TCAGGTGATT GTGGGTCAGG ATGAAGTGGT CGATCAAATT
CTGATTGCCA TGTTCTCCAA AGGACATGTG CTGTTAGAAG GTGTACCCGG CCTTGCCAAA
ACATTGATGA TCAGCACGCT CGCACGCTGT CTGTCGATGA CATTTGCCCG CATTCAGTTC
ACCCCCGATC TGATGCCTGC CGATATCACT GGGACTGATG TTCTCCAGGA AAACAAGGAA
ACGGGAAAAC GCGAGTTTCG TTTCATCACC GGGCCACTTT TCCATAATGT GGTGCTGGCA
GACGAAATTA ACCGGACACC ACCCAAAACT CAGGCTGCAC TTCTTGAGGC CATGCAGGAG
CGGCAGGTCA CTGTTGGTCA ATCCCGGCAT GTCCTCGCAG ATCCCTTCTT TGTGCTGGCG
ACGCAAAACC CGATCGAACA GGAAGGAACT TACACCCTTC CCGAAGCGCA GCAGGATCGC
TTCATGTTCA AAGTCTATGT CCGCTATCCC ACCTTTCTCG AAGAGCGGGA AATTGCGCGG
CGTACAACCT CTGTCCAGAG TGACAAGATT CAGCATGTTT TGAGTGGCGC CGATATCCTT
GAGATTCAAA AACTCGTGCG GCAGGTTCCT GCCAGCGAGC ATGTCATTGA TTATGCACTT
GCTCTGGTCA GGCAAACCCG TGTTCGCGAA CCGGGCGTCC CAGACTTTGT GAACGAGTGG
CTTTCCTGGG GTGCTGGCCC GCGTGCTGTG CAGTTTTTGC TGCTGGGTGC CAAGGCGCGA
GCACTACTCA ATGGCCGGAC ATACGTCTCA CCCGAAGATG TGGCGGCACT GGCCGCTCCG
GTCCTCAGGC ACCGCATCGT GACCAACTTT GCGGCGGAGA GCGAAGGAAT CAACACTGAC
AAAGTCGTGG AAGAACTGCT CAAAGTGACA CCCAGCAAGG AAGGCGAGCT GACTCGTGAC
CCAAGACTTC AGAAGATTTT TGCCGCCTGA
|
|---|
| Protein sequence | MADSGAALDM AIEKLTNAHR SIREQMSQVI VGQDEVVDQI LIAMFSKGHV LLEGVPGLAK
TLMISTLARC LSMTFARIQF TPDLMPADIT GTDVLQENKE TGKREFRFIT GPLFHNVVLA
DEINRTPPKT QAALLEAMQE RQVTVGQSRH VLADPFFVLA TQNPIEQEGT YTLPEAQQDR
FMFKVYVRYP TFLEEREIAR RTTSVQSDKI QHVLSGADIL EIQKLVRQVP ASEHVIDYAL
ALVRQTRVRE PGVPDFVNEW LSWGAGPRAV QFLLLGAKAR ALLNGRTYVS PEDVAALAAP
VLRHRIVTNF AAESEGINTD KVVEELLKVT PSKEGELTRD PRLQKIFAA
|
|---|
| |