| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1775 |
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| Symbol | |
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| ID | 9138476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2298240 |
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| End bp | 2299583 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003629804 |
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| Protein GI | 296122026 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATG TTCGGCTCAC AGGCGAATAT GTTCATCGAC TGACACCTCC ATCTATAAGT
GACGTTGTAA TGAATCCTTT CCAGTACCGT GATGGTGAAT TGTTTTGCGA AGAGATCCCA
GTTTCTCGAA TTGCCCGTGA CTTTGGCACC CCCTGCTGGA TTTATTCCAA AGCCATGCTG
CTGCATCAGC TGGGGCAGAT TCAACAGGCT TTTGCTGCTG TTAATCCTGT CATCTGCTTC
TCAGTCAAGG CGAACTCGAA CCTGGGCATT CTCAAGGTGA TGCGGGATGC TGGGAGCAGT
TTCGACGTGG TTTCGGGTGG CGAACTTTAC CGTGTGAAAA AAGCCGGAGC CGATACAGCC
AAGGTTGTCT TTGCAGGTGT CGGCAAGACA GATGCCGAGA TTCAACTCGC TCTCGAAAAT
CAGATTCTGA TGTTCGATGT CGAAAGTGAA CCAGAACTGG ATGCCATTGC TGCAGTGGCT
GAAAAAATGG GGGTCATTGC CCCCGTGGCG TTGCGTCTGA ATCCTGATAT TGATGCAAAA
ACCCATGCAA AAACCACCAC GGGCAAAAAG GGCAACAAGT TCGGGATGGA TATCGAACGG
GTCTTTGAAC TGGCCGACAA AGTTTTGAAG ACTCCCCGGT TGAAACTCGT CGGGATTCAC
ATGCATCTGG GTTCTCCAAT TTTGACAACA GAACCCTACG AACTGGCTGG GCAGAAGGCC
ATTGAAGTGA CGCGCGATCT GCGTGCTCGT GGACATGAGA TTGGCTGGGT GAATCTGGGT
GGCGGGTTTG GCATCAGTTA TCGGGGAAGC GAAGGCTTGC CTGCTTCTGA GTATGCCAAA
GTGATTGTGC CAGCCGTTCA GGAAATGGGT GTTCAGCTCG CTCTGGAGCC GGGCCGCTTC
ATCACTGGCA ATGCGGGGAT TCTCGTCAGT GAAGTGGTCT ACACCAAGCG GGAAGGTGGC
AAACTCTTCG TGATTCAGGA TGCGGCTATG AACGATCTCA TGCGTCCTGC GATGTACGAT
GCCTTCCATA AAATCTGGCC AGTGAAGGCT GCCGCCGAAC CGGCTAACTA TGAAGGCAAA
ATTGAAGGAT GCGAAGCTTG CGACGTCGTT GGCCCGGTGT GTGAATCGGG CGATTACTTC
GCCAAGGGAC GTTATTTGCC GCCAGTTCAG CGCGGTGATC TGATCAGCAT TTTCAGTGCG
GGTGCTTATG GGACATCCAT GAGCAGCAAC TACAACTCCC GCCCTCGTGC GGTCGAATTG
CTTGTTGATC AAGGGCACGT GCAGGTGGTC CGTCGTCGTG AGACCTACGA CGACTTGATT
GCCGCCGAGA TGGATGTTGA ATAA
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| Protein sequence | MNDVRLTGEY VHRLTPPSIS DVVMNPFQYR DGELFCEEIP VSRIARDFGT PCWIYSKAML
LHQLGQIQQA FAAVNPVICF SVKANSNLGI LKVMRDAGSS FDVVSGGELY RVKKAGADTA
KVVFAGVGKT DAEIQLALEN QILMFDVESE PELDAIAAVA EKMGVIAPVA LRLNPDIDAK
THAKTTTGKK GNKFGMDIER VFELADKVLK TPRLKLVGIH MHLGSPILTT EPYELAGQKA
IEVTRDLRAR GHEIGWVNLG GGFGISYRGS EGLPASEYAK VIVPAVQEMG VQLALEPGRF
ITGNAGILVS EVVYTKREGG KLFVIQDAAM NDLMRPAMYD AFHKIWPVKA AAEPANYEGK
IEGCEACDVV GPVCESGDYF AKGRYLPPVQ RGDLISIFSA GAYGTSMSSN YNSRPRAVEL
LVDQGHVQVV RRRETYDDLI AAEMDVE
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