Gene Plim_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1774 
Symbol 
ID9138475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2296691 
End bp2297983 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content53% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003629803 
Protein GI296122025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCTC CCACATTCAG AGAACTTCCA CCTCAATCGC CTGAGAGCAA AGCCCACAAA 
CAAGCAGGAA TTCAGTTCAT CCTCTGCACG CTTCTACTGG ATGTTTTAGG GATTGGACTG
ATTATTCCGG TTCTACCAGA TCTGGTGAAA ATGCTGGCTG GGAAGGACAA TTCGGACGCT
TCCCTGTGGT ACGGCTCACT GATCACGGCC TATGCCACGA TGCAGTTTCT GTTCGCGCCA
CTGATCGGTG CACTTTCAGA TCGGTTCGGT CGCCGACCGG TGCTGCTGAC GAGTATTGCA
GTACTGACAT TTGATTTTCT GCTGACAGCT TTTGCGCCCA ATCTCTGGTG GTTGCTTGTG
GCTCGCATTC TTTCGGGCAT GACCGCCGCC AACATTACAG CGGCCAATGC CTATATTGCT
GATATCAGTG ACGAAACAAC CCGCGTTCGC AATTTTGGTC TCGCCGGCGC CATGTTTGGT
CTTGGATTTG TACTGGGCCC ACTCTTGGGA GGGATCGCCG GCAGCTACAG TTCGAGGCTA
CCGTTTCTGC TGGCTGCACT GTTATCGGCC GTTAACTTTC TTTATGGCTG GTTGGTTTTG
CCAGAATCAT TACCCGCCGA GCAGCGTCAC TGGCCACGCA AATCGTCTTT CTTTCCGGGA
ACATCACTGC GATCACTGCG CGTCGAGCCT GTGGTTTTTG GACTGGCGAT CGCCTATTTC
TGTGTCAGTT TTGGAGAAAT GACCCTACGT TCGACGTGGA TTCTCTTTAC CGAAGAACGA
TTTCAATGGG ATGCCTTTCA GAATGGACTG GCCCTTTCGA TGGTGGGCCT GATGACGGCT
TTTGTTCAGG CAGTGCTGGT TCGGAGATTT AACAACCGGT TTGGAGAACG GGCAGCTCTG
CTCACTGGAC TTTTCATTTC CATGCTGGCG TATATCGGCT ATGCACTGGC AACCCGCGGC
GAGATGATGT TCGCGATCAT CATGCTCAGT TCGCTGGGTG GCATATCCGG GCCAACGGCT
CAATCGATTA TTGCCAAACG CGTTGATCCG AAAACTCAAG GACAAGTGCA GGGGGCGCTC
TCGAGCATTG CCAGCCTGAC CGCCATCCTC GCACCATCAC TGGGGACAGG AGCCTTCTGG
TACTTCACCC ATGAGCCGCA AAAGCTCTAC TTCCCGGGAA TCCCTTTCGT GATCGCTGCG
ATCTTCGCAT TCCTGGCTCT GCTGATTACT GCCTGGGTCA CACAGTCAAT CTCGACATCT
CAGAAAGCGA TAGACCCGAT CCATCAGACG TAA
 
Protein sequence
MSSPTFRELP PQSPESKAHK QAGIQFILCT LLLDVLGIGL IIPVLPDLVK MLAGKDNSDA 
SLWYGSLITA YATMQFLFAP LIGALSDRFG RRPVLLTSIA VLTFDFLLTA FAPNLWWLLV
ARILSGMTAA NITAANAYIA DISDETTRVR NFGLAGAMFG LGFVLGPLLG GIAGSYSSRL
PFLLAALLSA VNFLYGWLVL PESLPAEQRH WPRKSSFFPG TSLRSLRVEP VVFGLAIAYF
CVSFGEMTLR STWILFTEER FQWDAFQNGL ALSMVGLMTA FVQAVLVRRF NNRFGERAAL
LTGLFISMLA YIGYALATRG EMMFAIIMLS SLGGISGPTA QSIIAKRVDP KTQGQVQGAL
SSIASLTAIL APSLGTGAFW YFTHEPQKLY FPGIPFVIAA IFAFLALLIT AWVTQSISTS
QKAIDPIHQT