| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1730 |
|---|
| Symbol | |
|---|
| ID | 9138431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2251413 |
|---|
| End bp | 2253125 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_003629759 |
|---|
| Protein GI | 296121981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0586087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTAATT CGCAAATTGC TGCTGCACTG ACGGAACTTG CCGACCTGCT TGAGCTTCTG
GGAGAGAATG CTTTCCGAGT GCGGGCTTAT CGAAATGCAG CCCGTACGAT TGAGAGCTTG
CCGGATGAAG TCACGTTGCT GCTGGACCAG TCTCCCCATG CACTACTGGA ACTGGAAGGG
ATTGGAAAAG ATCTCGCACA GAAGATTTCC AGCCTCGCAA CAACTGGGCA ACTTGACCAA
CTCGATGAGG TCAGGTCGCA GGTTCCTCCA GGTGTTGTGC AGATGCTCAA AATTCCTGGG
CTGGGCCCGA AGAAAGTGGC CACTCTCTGG AAAGAACTCC AGGTGAACAC CTTGGACGAT
CTGCAGGCGG CAGCCACTGC CGGTCGAGTT GCCGAGTTAA AGGGCTTTGG CAAAAAGACA
GAGCAATCGA TATTGGAGGG CATTTCGCTG GCTGCAGAAG CGGGTCGGCG TGTATTGATT
TCCATCGCGC GAGAAGCTGC TGAACAGATC GCACAATCGT TACGAAAAGT CGCTGGCGTT
GAGCGAGTCG AAATTGCAGG GAGTGCACGA CGCTGGAAAG AAACGTGCGG TGACCTCGAC
TTGCTGGCGA TTGCCGCCGA TTCAACGACA GCTATGGATG AATTGTCCCA ACATCCACTC
GTTTCCCAGG TGGTCGCCAG AGGCGAAACG AAACAGCATG TTCGTTTGAA AAGTGGCATC
GACCTCGACT TGCGAGTTGT TCCACCGGAG TCTTTTGGAG CCGCATGGCA ATACTTCACC
GGATCAAAAG AACATAACGT TGTCATGCGG CGGCTGGCCC AGGAGAAGGG CCTGAAGCTG
AACGAATACG GCCTTTTCCG TGGTGAAGAG ATGGTCGCTG GTACCGACGA AGAGAGCATC
TACAAGACTC TTGAACTTCC GTGGATTCCC CCGGAGCTGC GGGAAAACCG GGGTGAATTT
CACTTGCAGG CCCCGATTGA TCTGATTCAG CCTGGCGATC TGCAGGGAGA CCTGCACATG
CACACTACAG CCACCGATGG TGCAGGCTCG ATCGAGGAAA TGATCGAAGG AGCCCGGGCA
GCAGGCCTTA AGTACATCGC GATCACCGAT CACTCCAAGC GGGTGGCGAT GGCCAATGGA
CTGGATTCTG TCCGCTTGCG GGAACATTGG CGAAAGATTG ATTCGATCCG CCAGAAAACC
AGAGGAATCG AAGTTCTTTG TGGTATCGAA TGTGACATCC TTGAAGATGC CACACTCGAT
TTACCTGATG ACGTTCTGGC GGAAGCCGAC TGGGTGATTG CGGTCTTGCA CTACGGCTTA
CGACAACCGG CAGAAATGAT CGAAAAGCGA CTGCTCGCAG CGATTCAGAA TCCTCATGTC
GATTGTATTG GGCATCCTTC AGGACGGCTG ATCGGATCAC GGGCACCGGC AGAGATCAAT
TACCATACCT TTTTGAAGGC TGCACAAGAT TACGGTGTCA TGCTGGAGAT CAACGCCAAT
CCGGCCCGGC TCGATCTGAA TGACATCCAG TCAGCCCGCG CCAAGGAATT GAGAATCCCG
ATCGTCATCA ATTCGGATTC GCACCACATC CATGGATTTC AGGTACTCGA GTACGGTGTG
CATCAGGCCC GCAGGGCAGG GCTGACGAAG GCCGATGTCG CCAACACACT CGACTTTGCC
AGCTTTCGTA ATCTCATTCG CCGCAATCGC TGA
|
|---|
| Protein sequence | MSNSQIAAAL TELADLLELL GENAFRVRAY RNAARTIESL PDEVTLLLDQ SPHALLELEG
IGKDLAQKIS SLATTGQLDQ LDEVRSQVPP GVVQMLKIPG LGPKKVATLW KELQVNTLDD
LQAAATAGRV AELKGFGKKT EQSILEGISL AAEAGRRVLI SIAREAAEQI AQSLRKVAGV
ERVEIAGSAR RWKETCGDLD LLAIAADSTT AMDELSQHPL VSQVVARGET KQHVRLKSGI
DLDLRVVPPE SFGAAWQYFT GSKEHNVVMR RLAQEKGLKL NEYGLFRGEE MVAGTDEESI
YKTLELPWIP PELRENRGEF HLQAPIDLIQ PGDLQGDLHM HTTATDGAGS IEEMIEGARA
AGLKYIAITD HSKRVAMANG LDSVRLREHW RKIDSIRQKT RGIEVLCGIE CDILEDATLD
LPDDVLAEAD WVIAVLHYGL RQPAEMIEKR LLAAIQNPHV DCIGHPSGRL IGSRAPAEIN
YHTFLKAAQD YGVMLEINAN PARLDLNDIQ SARAKELRIP IVINSDSHHI HGFQVLEYGV
HQARRAGLTK ADVANTLDFA SFRNLIRRNR
|
|---|
| |