Gene Plim_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1724 
Symbol 
ID9138425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2239933 
End bp2241345 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content53% 
IMG OID 
Productamine oxidase 
Protein accessionYP_003629753 
Protein GI296121975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTG ATTCTCTCAA TTCGCAACAG GCCGAACGTG AGAGAGCAGA TTTGGAATGT 
GATCCCAGGA TTAACTTGAG AGCCTCTGAT GAGAAAGTTT GCGGAGTGAC GACGGATTCG
GTTGGAATTG TCGGGGCGGG CCTGGCCGGA TTGGCCTGCG CTCTCCAGTT ATCTTCCATG
GGAATTCCGT GTGCAGTCTT CGAGGCCAGC GATGCACCGG GAGGACGCAT CCGCACAGAT
TTCCATGAGG GATTTCGCCT GGATCGTGGT TTTCAAGTCT TGCAGACGGC GTATCCAGAA
GCTCAGGCCG TCCTTGATTA TCCTGCACTC AAACTTTGTT CGTTTAATCC CGGTGCTTTG
GTCCATTATC AAGGTGACTG GAAATTGATG GCCGACCCCT GGCGAAAGCC ATCGACAGCG
TGGGCCAGTT TGAATTCTGG TTTCGCAAAC TTTGCTGACT TCTGGAAGCT GTACCGCCTT
CGCCAGCGGT TACTCTCGAC GAGTATCGAG CAGATCTGGG ATGAGCCCGA GTTACCAACC
ATCGACTACC TGCAGAAGAA CATTGGCTTC TCCAGATCGC TGATCGAAGC TTTTTTTCGT
CCGTGGTACT CCGGCATTTT TCTGGAGGCC GACCTGCAGA CAACCAGTCG ATTCTTCAAC
TTTGTTTTCA AAATGTTAGC GGAAGGTGAG GCCGCACTCC CTGCTCTGGG AATGCAGCAG
ATTCCCGAGC AACTGGCCAG CCGGCTTCCC CAAGGGACAA TCCATTATCT TTCGCCGGTC
GAGAAGATTG ACGGCCAGAC GCTGGTTTTC GCCAACGGAA GGAAAGAATC CTTTCCCACA
ATTGTTCTCG CCACAGATGG CCTTTCTGCC ACAAGGCTGA GTGAAGGATT CATCCCGGTA
ACGAAAACAT GTTCGACGGC CTGCCTCTAC TTCAGTTGTG AGATACCGCA TGTTGCTCAT
CGCTGGTTAA TGCTCAATGG AGACGGGCAT GGGCCTATCA ACAATCTTTG CTTCCCAGCC
GGTGTCTCTC CCGATTACGC ACCAGCAGGC AAAACTCTGA TATCAGCATC AGTGGTGGGG
GCAGCCGCCC AAAGCGATCC AGAGAAATTG CAGTCTGATG TTCGCCAGCA GATTGAAAGC
TGGTTCGGCT TGAAATCGAA ATCGCATTCG CAGGCTAATC CATGGTCGGG ATCTCCATTG
CCGCAACTGG AGCATTTGCG AACCTATCGG ATCGAGCATG CGCTGCCAGC GCAGCCCGTT
GGAAAACTCT CGGGATCGCG ACTGAAGCAT GATTTTCGGC CAGCGATGCT CAGACCTGGA
CTCTACATTG CGGGTGATTA TCTGGAGACA GCTTCGATTC AAGGGGCGTT GGCAAGTGGT
CGCCGGGTGG CGGAAGCGAT TGTCAATCAT TGA
 
Protein sequence
MKSDSLNSQQ AERERADLEC DPRINLRASD EKVCGVTTDS VGIVGAGLAG LACALQLSSM 
GIPCAVFEAS DAPGGRIRTD FHEGFRLDRG FQVLQTAYPE AQAVLDYPAL KLCSFNPGAL
VHYQGDWKLM ADPWRKPSTA WASLNSGFAN FADFWKLYRL RQRLLSTSIE QIWDEPELPT
IDYLQKNIGF SRSLIEAFFR PWYSGIFLEA DLQTTSRFFN FVFKMLAEGE AALPALGMQQ
IPEQLASRLP QGTIHYLSPV EKIDGQTLVF ANGRKESFPT IVLATDGLSA TRLSEGFIPV
TKTCSTACLY FSCEIPHVAH RWLMLNGDGH GPINNLCFPA GVSPDYAPAG KTLISASVVG
AAAQSDPEKL QSDVRQQIES WFGLKSKSHS QANPWSGSPL PQLEHLRTYR IEHALPAQPV
GKLSGSRLKH DFRPAMLRPG LYIAGDYLET ASIQGALASG RRVAEAIVNH