Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1720 |
Symbol | |
ID | 9138421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2233804 |
End bp | 2234472 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_003629749 |
Protein GI | 296121971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.739414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTGC TGTTCGATCT CGATGGTACG CTCACAGATC CATTTGAAGG GATTACAAAC TGTATTCGCT ATGCTTTGAA ACAGAACGGT TTTGAAGCAC CTGCTGCGCA AAATTTGAAG TGGTGCATCG GCCCACCACT TCGATCGAGC TTCCAGCAGT TAACCGGGAG TGACAACCAG GATCTGCTGG ACAATTGCCT CAAGTCCTAC CGTGAACGAT TCACTGCATC AGGGCTTTAT GAGAACCGGC TTGTCGATGG GATTGTTGAA GTTCTTGAGG GGCTCGATCG CCAGAAACAC ACGCTCTGGG TCGCCACTTC AAAACCGGCT GTCTATGCAC GCCGGATTAT CGCCCACTTC GGTCTGGATC AGTATTTTCT CAATGTCTAC GGGAGCGAAC TCGATGGGAC CCGCACCAAC AAAGTTGAAC TGCTGAATCA TCTCTTGCAG AAGGAACAGC TTTCGCCAGC CGACACCCTG ATGATTGGTG ATCGAGAACA TGATGTCTAC GGTGCCAGAA GCAATCAGCT TGCTGCCATT GGCGTCCTGT GGGGATACGG CTCTCACGAA GAGTTGACTC AGGCCGGCGC TCATGCGCTT GTCGACACAC CTGGCGAACT CAGTCTGCTG TTAAACAACT GGGCCTTTCA TCAGCCCGTT ACGCCTTGA
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Protein sequence | MHLLFDLDGT LTDPFEGITN CIRYALKQNG FEAPAAQNLK WCIGPPLRSS FQQLTGSDNQ DLLDNCLKSY RERFTASGLY ENRLVDGIVE VLEGLDRQKH TLWVATSKPA VYARRIIAHF GLDQYFLNVY GSELDGTRTN KVELLNHLLQ KEQLSPADTL MIGDREHDVY GARSNQLAAI GVLWGYGSHE ELTQAGAHAL VDTPGELSLL LNNWAFHQPV TP
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