Gene Plim_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1698 
Symbol 
ID9138399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2202951 
End bp2203703 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003629727 
Protein GI296121949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATAC GTTTCCGCTG TAATGCCTGC GGGCATCGGT TATCAATCAC CTCGAGTAAA 
CAGGGGCAAA CGACCACCTG TCCGATCTGC CAGAGTGAGA CCACCATCCC CTTCGAAGTC 
GATGATCTTA ACAATCATAC TCACGAGGAT ATCGAAAACA ATCAGCCTCA AGCAGTCGAT 
ACTGAACCCT CTGCAGAACC TCCGGAAACT GCTCAGCGTC TTCCCGTGGC TGCTAAACCT 
CGATCGATCA AAAGGATTCC CATCGATCTG GAGGAGATGG ATCTTACGCC TATGGTCGAT 
GTCACCTTTC TGCTGCTCAT TTTCTTCATG ATCACGGCCT CCTTCAGCCT GCAGAAGACA 
ATTCCATTCC CCACGCCTGA CCCACAAAAA TCGGGTGGCA AAGCCTCTTT GCAATCCCTC 
GATGATCTGC TCAACCAATC GATTCTTGTG GAAGTCAGTC GAGAAGGAAA AATCACGATT 
GATCGTCGAC CGATTGAGAC GGACTCTCGA GTACTCGAAG ATGAGTTCCG CCTGCAGATG 
ACTCGTGACA ATAAACAGGA ACTGGTTCTG ACTGCGGACC CTGCGGCTAA GCACCGCCTG 
GTGATCACAA TCCTCGATGC TGCCAATGCT GCAGGATTGC AGAAAATTCG GATCGTCACA 
GCCGGCAGTC AAGTACCACT CAAAGTCACT CGAATTTCGC CAGCTACGAA TCTCACCCGG 
ACGCTCACTC AAACCATGAC GGAGGGAGTG TGA
 
Protein sequence
MPIRFRCNAC GHRLSITSSK QGQTTTCPIC QSETTIPFEV DDLNNHTHED IENNQPQAVD 
TEPSAEPPET AQRLPVAAKP RSIKRIPIDL EEMDLTPMVD VTFLLLIFFM ITASFSLQKT 
IPFPTPDPQK SGGKASLQSL DDLLNQSILV EVSREGKITI DRRPIETDSR VLEDEFRLQM 
TRDNKQELVL TADPAAKHRL VITILDAANA AGLQKIRIVT AGSQVPLKVT RISPATNLTR 
TLTQTMTEGV