Gene Plim_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1689 
Symbol 
ID9138390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2190548 
End bp2191564 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content54% 
IMG OID 
ProductATPase associated with various cellular activities AAA_3 
Protein accessionYP_003629718 
Protein GI296121940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACAG AAAAACGAGA CTTTGACGAT TTTCTGGAGA AGTTCCGCAA ACACCGTGAA 
CTGATGCAGG AAGAACTCAG CAAGATCATC GTTGGTCAAA AGCCTGTTAT TGAGCAGATT
CTCGGAGCTA TCTTCACTGG TGGGCATTGC CTCCTGGAAG GTGTGCCTGG TCTTGCCAAA
ACTCTCACAG TTGCCACGAT CGCTCAGATT CTGGATGTCC ACTTCAAACG CGTGCAGTTC
ACTCCCGATC TCATGCCTTC GGATATCACG GGTACGAACG TCCTTGACGA AAACGAAAGC
GGCCGACGCG AGTTCCGTTT TGTCGAAGGC CCGGTCTTCA CGAACGTCTT ACTGGCCGAC
GAAATCAATC GTACGCCACC GAAAACACAG GCAGCACTTT TGCAGGCAAT GCAGGAACGT
GAGGTGACTG TCGGTCAAAC CACCTACCGT CTGCCAGAGC CTTTCTTTGT CATCGCCACT
CAGAATCCCA TTGAGCAGGA AGGAACTTAC CCACTCCCTG AGGCACAACT TGACCGCTTC
ATGTTCAACG TCGTCGTTGA CTATCCCAAT CTCTCGGAAG AAGAGGAAAT TCTGACCGCG
ACCACACGCG GCGAACGACC GGAGATCCGT AAAGTCCTTT CAGCCAAGTC GATTCTGTTC
CTGCAAAAGC AGGTGAGCAT GGTCGAAATT GGCCCGCTCA CCGTGAACTA TGTGGCCCGG
TTAGTTCGCG CCACCAGACC GCGCGATGAT TCGGCACCGA AGTTCATCCG CGACCTGGTC
GATTGGGGAG CAGGGCCCAG AGCCGGGCAA TTCCTGATTG CCGGGGCCAA AGCCATGGCG
GCGATGGATG GTCGCCCGAG CGTCGCCATT GAAGATATTC ATCGCGTGGC CATTCCTGTT
CTCAGGCATC GCATTTCCAC CAACTTCCAG GCCCAGGCTG AAGGACTCTC ACGTGAAGCG
ATTATTGCCC GATTGCTCGA TGCCGTCCCT GAGCCATCGA TTAAGAAATA CTCCTGA
 
Protein sequence
MATEKRDFDD FLEKFRKHRE LMQEELSKII VGQKPVIEQI LGAIFTGGHC LLEGVPGLAK 
TLTVATIAQI LDVHFKRVQF TPDLMPSDIT GTNVLDENES GRREFRFVEG PVFTNVLLAD
EINRTPPKTQ AALLQAMQER EVTVGQTTYR LPEPFFVIAT QNPIEQEGTY PLPEAQLDRF
MFNVVVDYPN LSEEEEILTA TTRGERPEIR KVLSAKSILF LQKQVSMVEI GPLTVNYVAR
LVRATRPRDD SAPKFIRDLV DWGAGPRAGQ FLIAGAKAMA AMDGRPSVAI EDIHRVAIPV
LRHRISTNFQ AQAEGLSREA IIARLLDAVP EPSIKKYS