Gene Plim_1609 details

Gene Information

• Locus tag: Plim_1609
• ID: 9138310
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2081013
• End bp: 2081612
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 50%
• Product: protein of unknown function DUF820
• Protein accession: YP_003629641
• Protein GI: 296121863

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGATTG CTCCGATGCC TCCTGTCACA CTGGATGAAT TTCTGCGGAG TGAAGCGGAA 
GCTCCCGAGG GTGTGACGTT AGAACTGATC GATGGCAAAT TGGTGGAGAG GCCATCGATG 
ACGACACGAG GAAGATTGCA TGCATTCGTG ATGTCGCTTC TCGTCTATGA ACTTGTGAGA 
TGGAGCCAGT CTTTCCATCA AAAACCTGTT GAGATTGGCA GTGGCGAAGC GAGATGCCGT 
CTGACGATGG AGAATGATAC AATTGTTGGT GTTGATGCAG GTGTGTGGAT TGGTGAACAA 
TATGCGTCAC CATCCAACGA CCCGCCACTT TACGAAGGCC CACCTGTTGT CGCCGCTGAG 
ATTCTTTCGC CGAGCGATAA AAATGAGTAT GTCGATGAAA AAATCGCTGC TTATCTTGCC 
GCTGGTGTTC ATCAGGTCTG GATCCTCGAT CCGATGTGGC GAACCGTAAC GGTCTATCGC 
CCAGACTCAA AACCAGCTTT CTATGCCGAA GACGATGTCC TTAATGCGGC TCCCGATTTG 
CCCGGATTTT CACTGCCTGT TTCCCAGTTT TTCAGCAAGT ATGTCAAACG ACCTGTCTGA 

 

Protein sequence

MSIAPMPPVT LDEFLRSEAE APEGVTLELI DGKLVERPSM TTRGRLHAFV MSLLVYELVR 
WSQSFHQKPV EIGSGEARCR LTMENDTIVG VDAGVWIGEQ YASPSNDPPL YEGPPVVAAE 
ILSPSDKNEY VDEKIAAYLA AGVHQVWILD PMWRTVTVYR PDSKPAFYAE DDVLNAAPDL 
PGFSLPVSQF FSKYVKRPV